RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SPCS2Q15005 226 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 TMUB2Q71RG4 321 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 P2RY12Q9H244 342 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 ACSS1Q9NUB1 689 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF814B7Z6K7 855 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 GALR2O43603 387 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-201ENST00000331920 CYBAP13498 195 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 RRADP55042 308 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF280AP59817 542 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-201ENST00000331920 BPIFB3P59826 476 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 SLC35A1P78382 337 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 PCK2Q16822 640 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 TMEM64Q6YI46 380 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 PGBD5Q8N414 524 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 OR2A1Q8NGT9 310 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 MRPS24Q96EL2 167 aaKnown RBP15.13■□□□□ 0.01
PTCH1-201ENST00000331920 EPHX3Q9H6B9 360 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 WDR76Q9H967 626 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 NRIP3Q9NQ35 241 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF638Q14966 1978 aaKnown RBP15.13■□□□□ 0.01
PTCH1-201ENST00000331920 TMEM221A6NGB7 291 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 TYROBPO43914 113 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 FOXA1P55317 472 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 EMX1Q04741 257 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-201ENST00000331920 KCNG3Q8TAE7 436 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 PECRQ9BY49 303 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 INPP5EQ9NRR6 644 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 SHC1P29353 583 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 S100A11P31949 105 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 NTHL1P78549 312 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF528Q3MIS6 628 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 PXDC1Q5TGL8 231 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 KDM4DQ6B0I6 523 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 RNASEKQ6P5S7 137 aaKnown RBP15.13■□□□□ 0.01
PTCH1-201ENST00000331920 DRAM2Q6UX65 266 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 SIAH3Q8IW03 269 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 CENPOQ9BU64 300 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 GORASP2Q9H8Y8 452 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 PTPRUQ92729 1446 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 TEX50A0A1B0GTY4 177 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF141Q15928 474 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 SLC35E4Q6ICL7 350 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 NAXDQ8IW45 347 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 SRPK3Q9UPE1 567 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 C1orf105O95561 183 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 NAGAP17050 411 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 HTR6P50406 440 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 TPMTP51580 245 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 GAMTQ14353 236 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 ACSM6Q6P461 480 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 ZADH2Q8N4Q0 377 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 DCAF13Q9NV06 445 aaKnown RBP15.13■□□□□ 0.01
PTCH1-201ENST00000331920 A0A0B4J203 849 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF840PA6NDX5 716 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 CYR61O00622 381 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 SLC25A4P12235 298 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 NKX2-1P43699 371 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-201ENST00000331920 MLLT11Q13015 90 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-201ENST00000331920 SEC22CQ9BRL7 303 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 OTOFQ9HC10 1997 aa15.13■□□□□ 0.01
PTCH1-201ENST00000331920 DIP2CQ9Y2E4 1556 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 DNASE2O00115 360 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-201ENST00000331920 OPRD1P41143 372 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 ACOT6Q3I5F7 207 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-201ENST00000331920 RPL22L1Q6P5R6 122 aaKnown RBP15.12■□□□□ 0.01
PTCH1-201ENST00000331920 GDPGP1Q6ZNW5 385 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 GHSRQ92847 366 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 ACY3Q96HD9 319 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 GPR173Q9NS66 373 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 GPR171O14626 319 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 SLC10A2Q12908 348 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-201ENST00000331920 OPN5Q6U736 354 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 GASTP01350 101 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 RHOBP62745 196 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 ETFDHQ16134 617 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 ANGPTL5Q86XS5 388 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 MFRPQ9BY79 579 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 CGGBP1Q9UFW8 167 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-201ENST00000331920 A0A1W2PNV4 684 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 OR5AL1P0C617 328 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 TIGITQ495A1 244 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF620Q6ZNG0 422 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 NRARPQ7Z6K4 114 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 ACTR3CQ9C0K3 210 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-201ENST00000331920 PXDNQ92626 1479 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 RBP4P02753 201 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 TTRP02766 147 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 DRD1P21728 446 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 FGF7P21781 194 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 CD40P25942 277 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 RFC3P40938 356 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 ANKRD16Q6P6B7 361 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 LILRB1Q8NHL6 650 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-201ENST00000331920 RANBP9Q96S59 729 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 CABLES2Q9BTV7 478 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 HCFC1R1Q9NWW0 138 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 ENDOGQ14249 297 aaKnown RBP15.12■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF534Q76KX8 674 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 DCXRQ7Z4W1 244 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms