RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PRAMEF17Q5VTA0 474 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 VITQ6UXI7 678 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 MRPL43Q8N983 215 aaKnown RBP13.08□□□□□ -0.32
SNX20-202ENST00000330943 MCHR2Q969V1 340 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 CTHRC1Q96CG8 243 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 YBX2Q9Y2T7 364 aaKnown RBP13.08□□□□□ -0.32
SNX20-202ENST00000330943 ALPK2Q86TB3 2170 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 LOC100509620A0A075B734 347 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 FADS1O60427 444 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 MELTFP08582 738 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 ZNF28P17035 718 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 CASRP41180 1078 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 ITPRIPL2Q3MIP1 535 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 EXD3Q8N9H8 876 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 ZBTB8AQ96BR9 441 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 C3orf49Q96BT1 292 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 COA4Q9NYJ1 87 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 CYB5R1Q9UHQ9 305 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 DTX4Q9Y2E6 619 aa13.08□□□□□ -0.32
SNX20-202ENST00000330943 RAB19A4D1S5 217 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 F8W036 122 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 SLC17A2O00624 439 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 KCNAB3O43448 404 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 CYB5AP00167 134 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 F12P00748 615 aaPredicted RBP13.07□□□□□ -0.32
SNX20-202ENST00000330943 CD14P08571 375 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 SLC25A4P12235 298 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 IGFALSP35858 605 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 PBX2P40425 430 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 SLC25A1P53007 311 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 BLOC1S1P78537 153 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 DMWDQ09019 674 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 ALG10Q5BKT4 473 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 WDR38Q5JTN6 314 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 FCRL6Q6DN72 434 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 FIGLAQ6QHK4 219 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 FAM122BQ7Z309 247 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 RD3Q7Z3Z2 195 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 BPIFB2Q8N4F0 458 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 TMEM229BQ8NBD8 167 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 MOGAT1Q96PD6 335 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 AMELYQ99218 206 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 IGFLR1Q9H665 355 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 IGKV1D-42A0A075B6H8 117 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 EN2P19622 333 aaPredicted RBP13.07□□□□□ -0.32
SNX20-202ENST00000330943 ADPRHP54922 357 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 SSBP1Q04837 148 aaKnown RBP13.07□□□□□ -0.32
SNX20-202ENST00000330943 SRSF5Q13243 272 aaKnown RBP13.07□□□□□ -0.32
SNX20-202ENST00000330943 ENPP2Q13822 863 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 NKPD1Q17RQ9 610 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 PSRC1Q6PGN9 363 aaPredicted RBP13.07□□□□□ -0.32
SNX20-202ENST00000330943 GATSQ8NAP1 163 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 RERGQ96A58 199 aaPredicted RBP13.07□□□□□ -0.32
SNX20-202ENST00000330943 C4orf45Q96LM5 186 aa13.07□□□□□ -0.32
SNX20-202ENST00000330943 GPX7Q96SL4 187 aaPredicted RBP13.07□□□□□ -0.32
SNX20-202ENST00000330943 MYEF2Q9P2K5 600 aaKnown RBP13.07□□□□□ -0.32
SNX20-202ENST00000330943 H0YGG7 62 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 LINC01387J3KSC0 135 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 HRKO00198 91 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 PVRP15151 417 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 SDHAP31040 664 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 ARF3P61204 181 aaPredicted RBP13.06□□□□□ -0.32
SNX20-202ENST00000330943 RASGEF1BQ0VAM2 473 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 PRRT3Q5FWE3 981 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 LPCAT3Q6P1A2 487 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 TMEM71Q6P5X7 295 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 SPAG16Q8N0X2 631 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 ARMC10Q8N2F6 343 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 FLVCR1-AS1Q8TAF5 88 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 PAQR8Q8TEZ7 354 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 C2CD4CQ8TF44 421 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 SLC22A18Q96BI1 424 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 BIN3Q9NQY0 253 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 LRIT1Q9P2V4 623 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 ZNF736B4DX44 427 aaPredicted RBP13.06□□□□□ -0.32
SNX20-202ENST00000330943 SULT2B1O00204 365 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 ACTL6AO96019 429 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 ALOX5APP20292 161 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 RORAP35398 523 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 VWA2Q5GFL6 755 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 H3F3CQ6NXT2 135 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 INO80EQ8NBZ0 244 aaPredicted RBP13.06□□□□□ -0.32
SNX20-202ENST00000330943 OR1J4Q8NGS1 313 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 OR4C3Q8NH37 302 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 THAP6Q8TBB0 222 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 ANKRD9Q96BM1 317 aaPredicted RBP13.06□□□□□ -0.32
SNX20-202ENST00000330943 SPACA7Q96KW9 195 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 DCBLD2Q96PD2 775 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 UQCC2Q9BRT2 126 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 SLC19A3Q9BZV2 496 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 STARD5Q9NSY2 213 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 GRHPRQ9UBQ7 328 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 ZNF629Q9UEG4 869 aaPredicted RBP13.06□□□□□ -0.32
SNX20-202ENST00000330943 MSRAQ9UJ68 235 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 MKL2Q9ULH7 1088 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 LHX6Q9UPM6 363 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 OR6C76A6NM76 312 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 EFCAB7A8K855 629 aa13.06□□□□□ -0.32
SNX20-202ENST00000330943 DCNP07585 359 aaKnown RBP13.06□□□□□ -0.32
SNX20-202ENST00000330943 RFC3P40938 356 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms