RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CSAG2Q9Y5P2 127 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 HTTP42858 3142 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 C9orf170A2RU37 121 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 RNASEK-C17orf49H0YIS7 233 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF432O94892 652 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 AQP2P41181 271 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 EMDP50402 254 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 VASPP50552 380 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-201ENST00000327554 STARD6P59095 220 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 ACTR1AP61163 376 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 TOMM20Q15388 145 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 ODF4Q2M2E3 257 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 C9orf131Q5VYM1 1079 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 PRSS35Q8N3Z0 413 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF676Q8N7Q3 588 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 NUBPLQ8TB37 319 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 GPR148Q8TDV2 347 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 TSSK2Q96PF2 358 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 HRH4Q9H3N8 390 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 DUSP22Q9NRW4 184 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 FARSAQ9Y285 508 aaKnown RBP11.57□□□□□ -0.56
CCDC60-201ENST00000327554 MPDZO75970 2070 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF736B4DX44 427 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-201ENST00000327554 EEF1E1-BLOC1S5C9J1V9 151 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 C9JQL5 133 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 P2RX6O15547 441 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 PRICKLE3O43900 615 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-201ENST00000327554 BRINP1O60477 761 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 PSMB6P28072 239 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 CDKN2AP42771 156 aaKnown RBP11.57□□□□□ -0.56
CCDC60-201ENST00000327554 CAP1Q01518 475 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 ASPHD2Q6ICH7 369 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 MTSS1LQ765P7 747 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 ANKRD33Q7Z3H0 272 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 RAB42Q8N4Z0 105 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 EXD3Q8N9H8 876 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 OR4E2Q8NGC2 313 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 OR2L8Q8NGY9 312 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 DCUN1D4Q92564 292 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF775Q96BV0 537 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-201ENST00000327554 TMEM41AQ96HV5 264 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 SMIM8Q96KF7 97 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 RNF126Q9BV68 326 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 CHMP1AQ9HD42 196 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-201ENST00000327554 KLK13Q9UKR3 277 aa11.57□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF729A6NN14 1252 aaPredicted RBP11.56□□□□□ -0.56
CCDC60-201ENST00000327554 FAM157AC9JC47 383 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 CYB5AP00167 134 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 CD5P06127 495 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 PBX2P40425 430 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 AKR1C3P42330 323 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 FLT3LGP49771 235 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 ELOCQ15369 112 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 ISXQ2M1V0 245 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 PDE4DIPQ5VU43 2346 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 TMEM244Q5VVB8 128 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 LEG1Q6P5S2 330 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 ZSCAN4Q8NAM6 433 aaPredicted RBP11.56□□□□□ -0.56
CCDC60-201ENST00000327554 MFSD9Q8NBP5 474 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 OR2L3Q8NG85 312 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 FAM174AQ8TBP5 190 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 SLC39A7Q92504 469 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 SLC41A2Q96JW4 573 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 LMF1Q96S06 567 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 SPSB2Q99619 263 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 PHB2Q99623 299 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 ASH2LQ9UBL3 628 aa11.56□□□□□ -0.56
CCDC60-201ENST00000327554 A0A1W2PPC1 479 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 TMEM212A6NML5 194 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 DNAJB6O75190 326 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 MT-ND4LP03901 98 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 CSN2P05814 226 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 CPMP14384 443 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 CPT2P23786 658 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 PEBP1P30086 187 aaKnown RBP11.55□□□□□ -0.56
CCDC60-201ENST00000327554 KIR3DL2P43630 455 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 ID2Q02363 134 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 NKPD1Q17RQ9 610 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 OR2B11Q5JQS5 317 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 OR10K2Q6IF99 312 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 KIRREL2Q6UWL6 708 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 TMPPEQ6ZT21 453 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 ERN2Q76MJ5 926 aaKnown RBP11.55□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF627Q7L945 461 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 CDC20BQ86Y33 519 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 SAT2Q96F10 170 aaPredicted RBP11.55□□□□□ -0.56
CCDC60-201ENST00000327554 ZC3H10Q96K80 434 aaKnown RBP11.55□□□□□ -0.56
CCDC60-201ENST00000327554 NECAB3Q96P71 396 aaPredicted RBP11.55□□□□□ -0.56
CCDC60-201ENST00000327554 TRIM2Q9C040 744 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 COMMD4Q9H0A8 199 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 SLCO5A1Q9H2Y9 848 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 DZANK1Q9NVP4 752 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 DNAJB12Q9NXW2 375 aaKnown RBP11.55□□□□□ -0.56
CCDC60-201ENST00000327554 SLC2A8Q9NY64 477 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 CACFD1Q9UGQ2 172 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 TMED7Q9Y3B3 224 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 DOCK9Q9BZ29 2069 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 H0YIZ8 118 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF888P0CJ79 500 aaPredicted RBP11.55□□□□□ -0.56
CCDC60-201ENST00000327554 ST6GAL1P15907 406 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms