RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PCDHAC1Q9H158 963 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 C1orf198Q9H425 327 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 HINT3Q9NQE9 182 aaKnown RBP12.14□□□□□ -0.47
RPP40-201ENST00000319533 CMTM6Q9NX76 183 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 TAS2R5Q9NYW4 299 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 TAAR3PQ9P1P4 343 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 GPR160Q9UJ42 338 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 PCDHB10Q9UN67 800 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 SH3GLB1Q9Y371 365 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 GSTA4O15217 222 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 DHHO43323 396 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 WIPF1O43516 503 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 DEAF1O75398 565 aaPredicted RBP12.13□□□□□ -0.47
RPP40-201ENST00000319533 CLPTM1O96005 669 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 AVPP01185 164 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 THY1P04216 161 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 PGA4P0DJD7 388 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 PGA3P0DJD8 388 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 EPHA1P21709 976 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 PRDX6P30041 224 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 KDELR2P33947 212 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 SLC7A2P52569 658 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 CRYBA2P53672 197 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 TAS2R41P59536 307 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 SELENOVP59797 346 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 LIPEQ05469 1076 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 BNIP1Q12981 228 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 KRT72Q14CN4 511 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 HIST3H3Q16695 136 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 NKPD1Q17RQ9 610 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 CYBRD1Q53TN4 286 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 ACSM5Q6NUN0 579 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 FAHD2BQ6P2I3 314 aaPredicted RBP12.13□□□□□ -0.47
RPP40-201ENST00000319533 TTC33Q6PID6 262 aaPredicted RBP12.13□□□□□ -0.47
RPP40-201ENST00000319533 ZNF771Q7L3S4 317 aaPredicted RBP12.13□□□□□ -0.47
RPP40-201ENST00000319533 SLC15A3Q8IY34 581 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 ZNF519Q8TB69 540 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 SYNPRQ8TBG9 265 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 LZICQ8WZA0 190 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 ZNF566Q969W8 418 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 FAHD2AQ96GK7 314 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 TPD52L3Q96J77 140 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 SEPHS2Q99611 448 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 ZNF426Q9BUY5 554 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 TMPRSS13Q9BYE2 586 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 POLR2J2Q9GZM3 115 aaKnown RBP12.13□□□□□ -0.47
RPP40-201ENST00000319533 POLR2J3Q9H1A7 115 aaKnown RBP12.13□□□□□ -0.47
RPP40-201ENST00000319533 ZNF665Q9H7R5 613 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 SLCO1C1Q9NYB5 712 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 SLC7A7Q9UM01 511 aa12.13□□□□□ -0.47
RPP40-201ENST00000319533 C11orf98E9PRG8 122 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 TRIM77I1YAP6 450 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 MGRN1O60291 552 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 SERPINI2O75830 405 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 OR6A2O95222 327 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 FARS2O95363 451 aaKnown RBP12.12□□□□□ -0.47
RPP40-201ENST00000319533 EGR1P18146 543 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 UCP2P55851 309 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 KLF3P57682 345 aaPredicted RBP12.12□□□□□ -0.47
RPP40-201ENST00000319533 TMEM53Q6P2H8 277 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 CCDC121Q6ZUS5 278 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 C1QL2Q7Z5L3 287 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 PEG10Q86TG7 708 aaKnown RBP12.12□□□□□ -0.47
RPP40-201ENST00000319533 TSPAN32Q96QS1 320 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 SH3GL3Q99963 347 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 RBM4Q9BWF3 364 aaKnown RBP12.12□□□□□ -0.47
RPP40-201ENST00000319533 SLC19A3Q9BZV2 496 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 ZNF229Q9UJW7 825 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 MEGF8Q7Z7M0 2845 aa12.12□□□□□ -0.47
RPP40-201ENST00000319533 LOC105371242A0A075B767 164 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 IGHV1-69-2A0A0G2JMI3 117 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 CENPBD1B2RD01 187 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 J3QLI3 93 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 CXCR6O00574 342 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 KPNA4O00629 521 aaPredicted RBP12.11□□□□□ -0.47
RPP40-201ENST00000319533 NME4O00746 187 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 PLPP2O43688 288 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 OR5F1O95221 314 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 PTHP01270 115 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 MMP7P09237 267 aaPredicted RBP12.11□□□□□ -0.47
RPP40-201ENST00000319533 QDPRP09417 244 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 ASAH2BP0C7U1 165 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 FAM157BP0CG42 384 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 TNFRSF1BP20333 461 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 IFNA8P32881 189 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 RAD52P43351 418 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 LIMS1P48059 325 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 ZNF133P52736 654 aaPredicted RBP12.11□□□□□ -0.47
RPP40-201ENST00000319533 ACTG1P63261 375 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 SELENOWP63302 87 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 CCL8P80075 99 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 TEKQ02763 1124 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 ALKBH6Q3KRA9 238 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 SLC36A2Q495M3 483 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 TMEM154Q6P9G4 183 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 LRRC17Q8N6Y2 441 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 OR4K5Q8NGD3 323 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 OR1J2Q8NGS2 313 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 SGMS2Q8NHU3 365 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 SNX33Q8WV41 574 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms