RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MST1LQ2TV78 715 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 RFX4Q33E94 735 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 ZNF627Q7L945 461 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 AMIGO2Q86SJ2 522 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 ZNF611Q8N823 705 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 OR51L1Q8NGJ5 315 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 FBXW5Q969U6 566 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 SMR3AQ99954 134 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 MUC13Q9H3R2 512 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 REEP1Q9H902 201 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 SRA1Q9HD15 236 aaKnown RBP10.43□□□□□ -0.74
SCFD1-201ENST00000311943 COA3Q9Y2R0 106 aaPredicted RBP10.43□□□□□ -0.74
SCFD1-201ENST00000311943 IGHV2OR16-5A0A0B4J2B6 119 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 PRSS37A4D1T9 235 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 OR6C68A6NDL8 312 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 AQP12BA6NM10 295 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 SLC16A7O60669 478 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 MMP7P09237 267 aaPredicted RBP10.43□□□□□ -0.74
SCFD1-201ENST00000311943 ZNF32P17041 273 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 APEX1P27695 318 aaKnown RBP10.43□□□□□ -0.74
SCFD1-201ENST00000311943 LRP11Q86VZ4 500 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 AQP12AQ8IXF9 295 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 OR6V1Q8N148 313 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 OR10G2Q8NGC3 310 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 GNPDA2Q8TDQ7 276 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 SLC7A6Q92536 515 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 IFT27Q9BW83 186 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 NGBQ9NPG2 151 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 B3GAT2Q9NPZ5 323 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 CRNNQ9UBG3 495 aaPredicted RBP10.43□□□□□ -0.74
SCFD1-201ENST00000311943 TMEM5Q9Y2B1 443 aa10.43□□□□□ -0.74
SCFD1-201ENST00000311943 ZANQ9Y493 2812 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 WNT11O96014 354 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 GYPBP06028 91 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 FAM157BP0CG42 384 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 OR8G3PP0DMU2 310 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 ANOS1P23352 680 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 SDHAP31040 664 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 ZNF133P52736 654 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-201ENST00000311943 TSPAN31Q12999 210 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 ENDOGQ14249 297 aaKnown RBP10.42□□□□□ -0.74
SCFD1-201ENST00000311943 MTX3Q5HYI7 312 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 TMEM255AQ5JRV8 349 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 C10orf128Q5T292 105 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 C1orf146Q5VVC0 180 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 TMEM236Q5W0B7 351 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 LEG1Q6P5S2 330 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 SLC16A14Q7RTX9 510 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 OR52E2Q8NGJ4 325 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 ZNF416Q9BWM5 594 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 HCAR1Q9BXC0 346 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 TRIM15Q9C019 465 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 SEMA6AQ9H2E6 1030 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 PDP1Q9P0J1 537 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-201ENST00000311943 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-201ENST00000311943 MYEF2Q9P2K5 600 aaKnown RBP10.42□□□□□ -0.74
SCFD1-201ENST00000311943 REV1Q9UBZ9 1251 aa10.42□□□□□ -0.74
SCFD1-201ENST00000311943 TRIM64A6NGJ6 449 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 TRIM64BA6NI03 449 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 BHLHE40O14503 412 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 MITFO75030 526 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-201ENST00000311943 KRT36O76013 467 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 CCNOP22674 350 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 NOS3P29474 1203 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 TTKP33981 857 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 THBS4P35443 961 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 SH3BGRP55822 239 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-201ENST00000311943 PSG4Q00888 419 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 CORO6Q6QEF8 472 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 MAPK1IP1LQ8NDC0 245 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 OR9Q1Q8NGQ5 310 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 PYDC1Q8WXC3 89 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 LRTOMTQ8WZ04 291 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 GPX7Q96SL4 187 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-201ENST00000311943 RNF121Q9H920 327 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 MED20Q9H944 212 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 RPRD1BQ9NQG5 326 aaKnown RBP10.41□□□□□ -0.74
SCFD1-201ENST00000311943 CA10Q9NS85 328 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 LOC100509620A0A075B734 347 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 FAM183AA6NL82 134 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 GNGT2O14610 69 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 ZNF35P13682 527 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 PYCR1P32322 319 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 CENPAP49450 140 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 FABP6P51161 128 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 SMIM11AP58511 58 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 NKX6-1P78426 367 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-201ENST00000311943 KPNB1Q14974 876 aaKnown RBP10.41□□□□□ -0.74
SCFD1-201ENST00000311943 ADIPOQQ15848 244 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 SLC36A3Q495N2 470 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 PABPC1L2AQ5JQF8 200 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 ZNF774Q6NX45 483 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 DPY19L2P2Q6ZN68 376 aa10.41□□□□□ -0.74
SCFD1-201ENST00000311943 PAPD5Q8NDF8 572 aaKnown RBP10.41□□□□□ -0.74
SCFD1-201ENST00000311943 USB1Q9BQ65 265 aaKnown RBP10.41□□□□□ -0.74
SCFD1-201ENST00000311943 TRAF4Q9BUZ4 470 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-201ENST00000311943 ARFGEF3Q5TH69 2177 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 FLNAP21333 2647 aaKnown RBP10.4□□□□□ -0.74
SCFD1-201ENST00000311943 NPIPB13A6NJU9 1138 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 NPIPB4C9JG80 1138 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms