RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 BRI3BPQ8WY22 251 aa14.3□□□□□ -0.12
HCFC1-201ENST00000310441 DOCK7Q96N67 2140 aa14.3□□□□□ -0.12
HCFC1-201ENST00000310441 TMEM38AQ9H6F2 299 aa14.3□□□□□ -0.12
HCFC1-201ENST00000310441 TMEM72A0PK05 275 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 PAPLNO95428 1278 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 CSF3P09919 207 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 C1orf61Q13536 156 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 IL10RAQ13651 578 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 TMUB2Q71RG4 321 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 LMNTD1Q8N9Z9 388 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 TGIF2Q9GZN2 237 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 AK3Q9UIJ7 227 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 GPR55Q9Y2T6 319 aaPredicted RBP14.29□□□□□ -0.12
HCFC1-201ENST00000310441 TMEM97Q5BJF2 176 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 TIGD3Q6B0B8 471 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 TREX1Q9NSU2 369 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 TOPAZ1Q8N9V7 1692 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 BMPR1AP36894 532 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 EVX2Q03828 476 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 OR4F5Q8NH21 305 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 ZFPM2Q8WW38 1151 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 ZNF583Q96ND8 569 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 OR4F4Q96R69 305 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 RTL8AQ9BWD3 113 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 MED9Q9NWA0 146 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 MYOFQ9NZM1 2061 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 XRCC3O43542 346 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 COTL1Q14019 142 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 SLC35G1Q2M3R5 365 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 PLXDC2Q6UX71 529 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 TSEN54Q7Z6J9 526 aaKnown RBP14.29□□□□□ -0.12
HCFC1-201ENST00000310441 DHRS4Q9BTZ2 278 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 PISDQ9UG56 409 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 TRBV4-1A0A0J9YWV2 114 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 H3BQ06 376 aaPredicted RBP14.29□□□□□ -0.12
HCFC1-201ENST00000310441 FABP7O15540 132 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 CLDN17P56750 224 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 KIAA0141Q14154 515 aaPredicted RBP14.29□□□□□ -0.12
HCFC1-201ENST00000310441 SLC5A12Q1EHB4 618 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 SLC38A5Q8WUX1 472 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 CLCF1Q9UBD9 225 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 INTS1Q8N201 2190 aaKnown RBP14.29□□□□□ -0.12
HCFC1-201ENST00000310441 SORBS2O94875 1100 aaKnown RBP14.29□□□□□ -0.12
HCFC1-201ENST00000310441 GCSHP23434 173 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 C19orf47Q8N9M1 422 aaKnown RBP14.29□□□□□ -0.12
HCFC1-201ENST00000310441 OR4C5Q8NGB2 326 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 ZCWPW2A0A1B0GU75 182 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 GPR12P47775 334 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 TAZQ16635 292 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 DEFB110Q30KQ9 67 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 THNSL2Q86YJ6 484 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 LMO3Q8TAP4 145 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 NSG2Q9Y328 171 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 ACTL7AQ9Y615 435 aa14.29□□□□□ -0.12
HCFC1-201ENST00000310441 SERINC4A6NH21 518 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 WTIPA6NIX2 430 aaPredicted RBP14.28□□□□□ -0.12
HCFC1-201ENST00000310441 CCR9P51686 369 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 MRPS21P82921 87 aaKnown RBP14.28□□□□□ -0.12
HCFC1-201ENST00000310441 VAMP3Q15836 100 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 Q1RN00 199 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 SIAH3Q8IW03 269 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 STACQ99469 402 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 GALNT9Q9HCQ5 603 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 PSORS1C1Q9UIG5 152 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 PMP2P02689 132 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 DOC2BQ14184 412 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 OR2M7Q8NG81 312 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 LIPHQ8WWY8 451 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 UTP4Q969X6 686 aaKnown RBP14.28□□□□□ -0.12
HCFC1-201ENST00000310441 PLEKHA2Q9HB19 425 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 SH2D1BO14796 132 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 SCO1O75880 301 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 FPR3P25089 353 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 CD38P28907 300 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 DDOSTP39656 456 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 DOK3Q7L591 496 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 SLC38A6Q8IZM9 456 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 MED18Q9BUE0 208 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 SOCS6O14544 535 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 CD14P08571 375 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 NKX2-1P43699 371 aaPredicted RBP14.28□□□□□ -0.12
HCFC1-201ENST00000310441 IQCJQ1A5X6 159 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 ZNF628Q5EBL2 1059 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 RHBDD1Q8TEB9 315 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 NKX2-4Q9H2Z4 354 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 SCGB1C2P0DMR2 95 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 REEP5Q00765 189 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 HTR3DQ70Z44 454 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 SAT2Q96F10 170 aaPredicted RBP14.28□□□□□ -0.12
HCFC1-201ENST00000310441 NIT2Q9NQR4 276 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 SLCO3A1Q9UIG8 710 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 GABRQQ9UN88 632 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 LRRC3CA6NJW4 275 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 ADAM11O75078 769 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 AIFM1O95831 613 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 ZNF90Q03938 601 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 LHFPL2Q6ZUX7 228 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 OR51A4Q8NGJ6 313 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 LCORQ96JN0 433 aaPredicted RBP14.28□□□□□ -0.12
HCFC1-201ENST00000310441 C16orf70Q9BSU1 422 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms