RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 HIPK1Q86Z02 1210 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 LRRC18Q8N456 261 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 BPESC1Q9GZL8 116 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 RAB1BQ9H0U4 201 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 GORASP2Q9H8Y8 452 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 ARL8BQ9NVJ2 186 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 SLC7A8Q9UHI5 535 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 IGLV3-9A0A075B6K5 115 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 A0A1W2PRQ8 180 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 PTP4A3O75365 173 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 ADRA2AP08913 450 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 SAGP10523 405 aaPredicted RBP17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 HSD17B1P14061 328 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 ZNF32P17041 273 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 IFNA8P32881 189 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 ERVS71-1P61550 626 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 DGCR6Q14129 220 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 SLC36A2Q495M3 483 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 TMEM255AQ5JRV8 349 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 FAM27BQ5VT28 67 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 PODNL1Q6PEZ8 512 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 ZNF730Q6ZMV8 503 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 OAFQ86UD1 273 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 ARIH2OSQ8N7S6 290 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 NEU4Q8WWR8 484 aaPredicted RBP17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 SYT3Q9BQG1 590 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 SOX7Q9BT81 388 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 YAE1D1Q9NRH1 226 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 FZR1Q9UM11 496 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 ADAM18Q9Y3Q7 739 aa17.01■□□□□ 0.31
PDZRN3-202ENST00000308537 TRBV4-1A0A0J9YWV2 114 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 A8MV72 311 aaPredicted RBP17■□□□□ 0.31
PDZRN3-202ENST00000308537 SYNGR3O43761 229 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 ENTPD5O75356 428 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 DIRAS1O95057 198 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 TP53P04637 393 aaPredicted RBP17■□□□□ 0.31
PDZRN3-202ENST00000308537 SCG5P05408 212 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 DAOP14920 347 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 OMPP47874 163 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 CD47Q08722 323 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 RIN1Q13671 783 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 MAD2L1BPQ15013 274 aaPredicted RBP17■□□□□ 0.31
PDZRN3-202ENST00000308537 MESTQ5EB52 335 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 PABPC1L2AQ5JQF8 200 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 THEM4Q5T1C6 240 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 TMEM53Q6P2H8 277 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 PGAM4Q8N0Y7 254 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 ZNF786Q8N393 782 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 NSMAFQ92636 917 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 GPA33Q99795 319 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 PIMREGQ9BSJ6 248 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 TPK1Q9H3S4 243 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 RPS6KA6Q9UK32 745 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 SIGLEC7Q9Y286 467 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 ARL2BPQ9Y2Y0 163 aa17■□□□□ 0.31
PDZRN3-202ENST00000308537 LOC100509620A0A075B734 347 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 VSTM5A8MXK1 200 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 M0R233 179 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 LILRA1O75019 489 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 CLPTM1O96005 669 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 H1F0P07305 194 aaKnown RBP16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 FAM157BP0CG42 384 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 ZNF250P15622 560 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 RHCEP18577 417 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 APEX1P27695 318 aaKnown RBP16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 WNT5AP41221 380 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 ALDH3B1P43353 468 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 ERVK-25P63136 954 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 PSG4Q00888 419 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 GALK2Q01415 458 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 ENDOGQ14249 297 aaKnown RBP16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 ZBED5Q49AG3 693 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 ELFN2Q5R3F8 820 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 FAM205BPQ63HN1 556 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 THSD4Q6ZMP0 1018 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 FAM46AQ96IP4 442 aaKnown RBP16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 POM121L2Q96KW2 1035 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 Q96M85 177 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 C1orf198Q9H425 327 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 DYNLRB1Q9NP97 96 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 ADA2Q9NZK5 511 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 SPEF1Q9Y4P9 236 aa16.99■□□□□ 0.31
PDZRN3-202ENST00000308537 LYNX1G3V0Z9 82 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 H7C1C5 153 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 DCTN3O75935 186 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 NCR1O76036 304 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 HPXP02790 462 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 CD14P08571 375 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 TACSTD2P09758 323 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 LYNX1P0DP58 116 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 ZNF16P17020 682 aaPredicted RBP16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 LAP3P28838 519 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 MSX2P35548 267 aaPredicted RBP16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 RPS23P62266 143 aaKnown RBP16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 LCN6P62502 163 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 GGTLC2Q14390 218 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 ZNF101Q8IZC7 436 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 MSI2Q96DH6 328 aaKnown RBP16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 GPX7Q96SL4 187 aaPredicted RBP16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 MDFIQ99750 246 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms