RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 KCNS2Q9ULS6 477 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 LOC100289279A0A1B0GTE1 492 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ANKRD61A6NGH8 418 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ANKRD30BLA7E2S9 258 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 SULT1B1O43704 296 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ALDOBP05062 364 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 EPHA8P29322 1005 aaPredicted RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 EVX1P49640 407 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 FXYD4P59646 89 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 IL13RA1P78552 427 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 CYCSP99999 105 aaKnown RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 IL10RAQ13651 578 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 PRSS45Q7RTY3 260 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 GPR155Q7Z3F1 870 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 LIX1LQ8IVB5 337 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 RDH10Q8IZV5 341 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 C12orf45Q8N5I9 185 aaPredicted RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR5D18Q8NGL1 313 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 NECAB3Q96P71 396 aaPredicted RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 SELENOIQ9C0D9 397 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF700Q9H0M5 742 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLA2Q9H6Q3 261 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 C12orf4Q9NQ89 552 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 NPAP1Q9NZP6 1156 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 MRPS28Q9Y2Q9 187 aaKnown RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 LOXL2Q9Y4K0 774 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 CACNA1IQ9P0X4 2223 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 DVL2O14641 736 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF254O75437 659 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 DBHP09172 617 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ACHEP22303 614 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 MVDP53602 400 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 RRAS2P62070 204 aaPredicted RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 PSG6Q00889 435 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 DUSP2Q05923 314 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 EGR3Q06889 387 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ASAH1Q13510 395 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF141Q15928 474 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 CORO6Q6QEF8 472 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 C3P1Q6ZMU1 363 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF813Q6ZN06 617 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 MOB3CQ70IA8 216 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 GRAMD2AQ8IUY3 354 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 MAML2Q8IZL2 1156 aaPredicted RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 DNAAF1Q8NEP3 725 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 EMC7Q9NPA0 242 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 REV1Q9UBZ9 1251 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 KCNG2Q9UJ96 466 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 CES1P1Q9UKY3 287 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ARPC3O15145 178 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 FCGR2AP12318 317 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 BCKDHBP21953 392 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 SUMO3P55854 103 aaPredicted RBP10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR10A3P58181 314 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF117Q03924 483 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 FAM27D1Q5T7N8 215 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 THSD4Q6ZMP0 1018 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 WDR88Q6ZMY6 472 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 CNEP1R1Q8N9A8 125 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR56B1Q8NGI3 324 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 ASH2LQ9UBL3 628 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 CGGBP1Q9UFW8 167 aaPredicted RBP10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 KCNN3Q9UGI6 736 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 ING1Q9UK53 422 aaPredicted RBP10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 LOC107986453A0A1B0GWG9 222 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 PRAMEF27A3QJZ7 478 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 QDPRP09417 244 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 FOXF1Q12946 379 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 OTPQ5XKR4 325 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 TRAPPC6BQ86SZ2 158 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 KIF18BQ86Y91 864 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 SPACA9Q96E40 222 aaPredicted RBP10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 TXNDC15Q96J42 360 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 TWSG1Q9GZX9 223 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 TSPAN10Q9H1Z9 355 aaPredicted RBP10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 ARRDC1-AS1Q9H2J1 176 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLC22A11Q9NSA0 550 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 SIP14410 1827 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 SPTBP11277 2137 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 TSPAN4O14817 238 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 CCR9P51686 369 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 GRB2P62993 217 aaKnown RBP10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 LRRC69Q6ZNQ3 347 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 EGFL6Q8IUX8 553 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLC35B4Q969S0 331 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZBTB8AQ96BR9 441 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLAMF6Q96DU3 332 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 RAB3CQ96E17 227 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 RADILQ96JH8 1075 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZMAT3Q9HA38 289 aaKnown RBP10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 CALHM2Q9HA72 323 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 B9D1Q9UPM9 204 aa10.37□□□□□ -0.75
PCDHGC3-201ENST00000308177 BORCS7-ASMTA0A0B4J1R7 106 aa10.36□□□□□ -0.75
PCDHGC3-201ENST00000308177 CALCBP10092 127 aa10.36□□□□□ -0.75
PCDHGC3-201ENST00000308177 CCR6P51684 374 aa10.36□□□□□ -0.75
PCDHGC3-201ENST00000308177 MAP2K6P52564 334 aa10.36□□□□□ -0.75
PCDHGC3-201ENST00000308177 STK11Q15831 433 aa10.36□□□□□ -0.75
PCDHGC3-201ENST00000308177 SSX1Q16384 188 aa10.36□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLC36A2Q495M3 483 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms