RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 COA3Q9Y2R0 106 aaPredicted RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 KLHDC2Q9Y2U9 406 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 CAB39Q9Y376 341 aaPredicted RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 PCDHGA9Q9Y5G4 932 aaKnown RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 PNMA8CA0A1B0GUJ8 204 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF716A6NP11 495 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 K7ENP7 123 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 CCRL2O00421 344 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 VAMP5O95183 116 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 OR2T7P0C7T2 308 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 NTF4P34130 210 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 PTGS2P35354 604 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 OR12D2P58182 307 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 LSM3P62310 102 aaKnown RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ACTC1P68032 377 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ACTA1P68133 377 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 C3AR1Q16581 482 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 MEP1BQ16820 701 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 LIPKQ5VXJ0 399 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 VASNQ6EMK4 673 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 INO80CQ6PI98 192 aaPredicted RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 CDC20BQ86Y33 519 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 PHC2Q8IXK0 858 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ZADH2Q8N4Q0 377 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ZFP41Q8N8Y5 198 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 OR2T27Q8NH04 317 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 RAB2BQ8WUD1 216 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ZHX1-C8orf76Q96EF9 292 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 SLC25A44Q96H78 314 aaPredicted RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 C4orf36Q96KX1 117 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 OR51E2Q9H255 320 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ISYNA1Q9NPH2 558 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ING1Q9UK53 422 aaPredicted RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 SIRT4Q9Y6E7 314 aaPredicted RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 APC2O95996 2303 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 DNAJC13O75165 2243 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 TRGV5A0A0B4J1U4 118 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 E9PI62 339 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 NPIPA2E9PIF3 369 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 NPIPA3F8WFD2 350 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF432O94892 652 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 MPZL1O95297 269 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 IGHG1P01857 330 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 GAAP10253 952 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 CPEP16870 476 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF24P17028 368 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 CRABP1P29762 137 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 CLRN1P58418 232 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 NCS1P62166 190 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ACSM1Q08AH1 577 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF169Q14929 603 aaPredicted RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 HIST3H3Q16695 136 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 CDONQ4KMG0 1287 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 PHYHD1Q5SRE7 291 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF684Q5T5D7 378 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 FCRLAQ7L513 359 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 DPY19L4Q7Z388 723 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 KLBQ86Z14 1044 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 TMEM123Q8N131 208 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 RBMXL3Q8N7X1 1067 aaKnown RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 OR6N2Q8NGY6 317 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 NSMAFQ92636 917 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 CPNE4Q96A23 557 aaPredicted RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF775Q96BV0 537 aaPredicted RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 TRMT61AQ96FX7 289 aaKnown RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ADAD1Q96M93 576 aaKnown RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 OR2M2Q96R28 347 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 TAAR6Q96RI8 345 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 INTS14Q96SY0 518 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 SF3B5Q9BWJ5 86 aaKnown RBP6.18□□□□□ -1.42
PTCD2-201ENST00000308077 RNF167Q9H6Y7 350 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 NDUFB11Q9NX14 153 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 RAXQ9Y2V3 346 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 PCDHGB7Q9Y5F8 929 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 FLVCR1Q9Y5Y0 555 aa6.18□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF670-ZNF695F2Z2N8 137 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 J3QLW9 94 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 PSMD9O00233 223 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 TFECO14948 347 aaPredicted RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ZNHIT1O43257 154 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 AHCYL1O43865 530 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 CYTIPO60759 359 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 NOL3O60936 208 aaKnown RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 GPX5O75715 221 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ACTL6AO96019 429 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 IGHG3P01860 377 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 HLA-DQA2P01906 255 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF19P17023 458 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF182P17025 639 aaPredicted RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 CENPAP49450 140 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 SELENOPP49908 381 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 RPS3AP61247 264 aaKnown RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 VBP1P61758 197 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 RPS25P62851 125 aaKnown RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 NFATC3Q12968 1075 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 TPBGQ13641 420 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 BCL2A1Q16548 175 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 TP53I3Q53FA7 332 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 THEM4Q5T1C6 240 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 PDSS1Q5T2R2 415 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms