RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 HS3ST5Q8IZT8 346 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SVOPLQ8N434 492 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 FAM169BQ8N8A8 192 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ICA1LQ8NDH6 482 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SDR9C7Q8NEX9 313 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 OR4K13Q8NH42 304 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 LRTOMTQ8WZ04 291 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 AKAP1Q92667 903 aaKnown RBP eCLIP9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 STMN2Q93045 179 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 NMD3Q96D46 503 aaKnown RBP9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SNX18Q96RF0 628 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SH3GL3Q99963 347 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TMEM204Q9BSN7 226 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TEX12Q9BXU0 123 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PLA2G12AQ9BZM1 189 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SIAEQ9HAT2 523 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 VSX1Q9NZR4 365 aaPredicted RBP9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CRNNQ9UBG3 495 aaPredicted RBP9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 KLHL21Q9UJP4 597 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ATP23Q9Y6H3 246 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CADP27708 2225 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 IQCMA0A1B0GVH7 501 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 A0A1W2PPR1 153 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 RIIAD1A6NNX1 92 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 BHLHE40O14503 412 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PTHP01270 115 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CECR9P0C854 216 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OSMP13725 252 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CTLA4P16410 223 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF3P17036 446 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PRKACGP22612 351 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 POU1F1P28069 291 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CDKN2AP42771 156 aaKnown RBP9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 GIPRP48546 466 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PCBD1P61457 104 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 RAB1AP62820 205 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 HSF2Q03933 536 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PLP2Q04941 152 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SPOCK1Q08629 439 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PGGHGQ32M88 737 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF672Q499Z4 452 aaPredicted RBP9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SLC27A4Q6P1M0 643 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SKA3Q8IX90 412 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR52E2Q8NGJ4 325 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR8D4Q8NGM9 314 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NRGNQ92686 78 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 HTRA1Q92743 480 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NINJ1Q92982 152 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NABP1Q96AH0 204 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CENPNQ96H22 339 aaPredicted RBP9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NMNAT3Q96T66 252 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CCL19Q99731 98 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SEMA6AQ9H2E6 1030 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PLEKHF2Q9H8W4 249 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 RPRD1BQ9NQG5 326 aaKnown RBP9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PAPOLBQ9NRJ5 636 aaKnown RBP9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 KRT84Q9NSB2 600 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FAIMQ9NVQ4 179 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ENOPH1Q9UHY7 261 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ST6GALNAC2Q9UJ37 374 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PLEKHA6Q9Y2H5 1048 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 POLR1DQ9Y2S0 133 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 UGT2A1Q9Y4X1 527 aa9.58□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF503-AS2A6NEH8 195 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SHISA9B4DS77 424 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ATP6V1G2-DDX39BF2Z307 99 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 IGLV1-44P01699 117 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 HLA-DQA2P01906 255 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CELA3BP08861 270 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 LAP3P28838 519 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 APLNRP35414 380 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NAAAQ02083 359 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 GLO1Q04760 184 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FOXL2NBQ6ZUU3 175 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 GLB1L2Q8IW92 636 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 LNX2Q8N448 690 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 IL17RDQ8NFM7 739 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR10H5Q8NGA6 315 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR4Q3Q8NH05 313 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PLEKHA8Q96JA3 519 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FOXN4Q96NZ1 517 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PRRG3Q9BZD7 231 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NUAK2Q9H093 628 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 RACGAP1Q9H0H5 632 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 GABARAPL1Q9H0R8 117 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 C1orf198Q9H425 327 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NTN4Q9HB63 628 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 POLE4Q9NR33 117 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 B3GNT2Q9NY97 397 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CISD1Q9NZ45 108 aaKnown RBP9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF224Q9NZL3 707 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 MOKQ9UQ07 419 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 COA3Q9Y2R0 106 aaPredicted RBP9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FKBP7Q9Y680 259 aa9.57□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SAC3D1A6NKF1 404 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CYSRT1A8MQ03 144 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 C12orf71A8MTZ7 269 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 IGFBP1P08833 259 aaPredicted RBP9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CST2P09228 141 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PATE4P0C8F1 98 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms