RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 THEM4Q5T1C6 240 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 MZT2BQ6NZ67 158 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 LRRC69Q6ZNQ3 347 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 KRT77Q7Z794 578 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 RDH10Q8IZV5 341 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 PRSS35Q8N3Z0 413 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 OR5B2Q96R09 309 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 ABHD6Q9BV23 337 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 C11orf54Q9H0W9 315 aaPredicted RBP17.37■□□□□ 0.37
HOXC4-201ENST00000303406 MALT1Q9UDY8 824 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 PCDHGA1Q9Y5H4 931 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 V9GY05 133 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 AQP7P3A6NL99 342 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 IFITM5A6NNB3 132 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 TTLL8A6PVC2 850 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 SSX4O60224 188 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 SERPINA7P05543 415 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 PRKAR1AP10644 381 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 DPP4P27487 766 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 CFPP27918 469 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 RPS27P42677 84 aaKnown RBP17.37■□□□□ 0.37
HOXC4-201ENST00000303406 BIDP55957 195 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 SCAND1P57086 179 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 RPS15P62841 145 aaKnown RBP17.37■□□□□ 0.37
HOXC4-201ENST00000303406 PITPNAQ00169 270 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 WDR38Q5JTN6 314 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 TIGD3Q6B0B8 471 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 LRRN1Q6UXK5 716 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 TMPPEQ6ZT21 453 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 RAB43Q86YS6 212 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 ESX1Q8N693 406 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 OR1J4Q8NGS1 313 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 OR6X1Q8NH79 312 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 GFI1Q99684 422 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 WACQ9BTA9 647 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 TCF7L1Q9HCS4 588 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 MED29Q9NX70 200 aa17.37■□□□□ 0.37
HOXC4-201ENST00000303406 PCDHGA9Q9Y5G4 932 aaKnown RBP17.37■□□□□ 0.37
HOXC4-201ENST00000303406 A0A0G2JMP0 313 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 A0A0X1KG70 313 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 TRAF3IP2O43734 574 aaPredicted RBP17.36■□□□□ 0.37
HOXC4-201ENST00000303406 CBR3O75828 277 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 UBL3O95164 117 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 PAHP00439 452 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 IGHG1P01857 330 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 CALCBP10092 127 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 OTX2P32243 289 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 MAP2K3P46734 347 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 UBE2NLQ5JXB2 153 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 STAC2Q6ZMT1 411 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 CATSPERDQ86XM0 798 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 GLB1L2Q8IW92 636 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 CELF2-AS1Q8N7Q2 184 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 NOXO1Q8NFA2 376 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 OR4M2Q8NGB6 313 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 OR5H6Q8NGV6 325 aa17.36■□□□□ 0.37
HOXC4-201ENST00000303406 RBFOX1Q9NWB1 397 aaKnown RBP17.36■□□□□ 0.37
HOXC4-201ENST00000303406 C21orf140B9A014 251 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 C9orf172C9J069 976 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 CTDSPLO15194 276 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 PGA4P0DJD7 388 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 PGA3P0DJD8 388 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 NR2C1P13056 603 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 TMEM176BQ3YBM2 270 aaPredicted RBP17.35■□□□□ 0.37
HOXC4-201ENST00000303406 TMEM164Q5U3C3 297 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 AGAP6Q5VW22 663 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 LRRTM1Q86UE6 522 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 UBQLNLQ8IYU4 475 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 DUSP18Q8NEJ0 188 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 ST7LQ8TDW4 575 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 MCHR2Q969V1 340 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 RFT1Q96AA3 541 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 SLC25A44Q96H78 314 aaPredicted RBP17.35■□□□□ 0.37
HOXC4-201ENST00000303406 AGAP4Q96P64 663 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 NEDD4LQ96PU5 975 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 GPR87Q9BY21 358 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 BRD7Q9NPI1 651 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 ING1Q9UK53 422 aaPredicted RBP17.35■□□□□ 0.37
HOXC4-201ENST00000303406 CAMK2AQ9UQM7 478 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 R4GMQ9 66 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 KMT2EQ8IZD2 1858 aa17.35■□□□□ 0.37
HOXC4-201ENST00000303406 KIF26BQ2KJY2 2108 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 A0A1W2PNR3 127 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 TRABD2BA6NFA1 517 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 SULT2B1O00204 365 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 EIF1BO60739 113 aaKnown RBP17.34■□□□□ 0.37
HOXC4-201ENST00000303406 SLC43A1O75387 559 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 SRSF10O75494 262 aaKnown RBP17.34■□□□□ 0.37
HOXC4-201ENST00000303406 TPPPO94811 219 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 MT-CO3P00414 261 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 SNRPBP14678 240 aaKnown RBP17.34■□□□□ 0.37
HOXC4-201ENST00000303406 DCTDP32321 178 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 INPP1P49441 399 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 FMODQ06828 376 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 SYT9Q86SS6 491 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 WDFY1Q8IWB7 410 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 OR5M1Q8NGP8 315 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 ZNF671Q8TAW3 534 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 B3GNT4Q9C0J1 378 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 TMEM9BQ9NQ34 198 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms