RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SNED1Q8TER0 1413 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 LOC100289279A0A1B0GTE1 492 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF727A8MUV8 499 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 SELEP16581 610 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 CR2P20023 1033 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 GPR12P47775 334 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 GPR85P60893 370 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ERHP84090 104 aaKnown RBP9.58□□□□□ -0.88
CLIP1-201ENST00000302528 SOX4Q06945 474 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-201ENST00000302528 LEXMQ3ZCV2 418 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 SIAH3Q8IW03 269 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 LAX1Q8IWV1 398 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ZC3H3Q8IXZ2 948 aaKnown RBP9.58□□□□□ -0.88
CLIP1-201ENST00000302528 PGBD5Q8N414 524 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 RHOXF1Q8NHV9 184 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 FAM3DQ96BQ1 224 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 C20orf85Q9H1P6 137 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 POFUT1Q9H488 388 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 TXNRD2Q9NNW7 524 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 TAAR2Q9P1P5 351 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 KRTDAPP60985 99 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 SPANXN5Q5MJ07 72 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 LCN15Q6UWW0 184 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 NPWQ8N729 165 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 OR4C5Q8NGB2 326 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 RLN3Q8WXF3 142 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 ACTR3CQ9C0K3 210 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 RBFOX1Q9NWB1 397 aaKnown RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 BAZ2AQ9UIF9 1905 aaKnown RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 MTNR1BP49286 362 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 MAP2K6P52564 334 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 KIAA1024LP59773 190 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 ALKBH1Q13686 389 aaKnown RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 FCN2Q15485 313 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 PLK5Q496M5 336 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF574Q6ZN55 896 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 BATF2Q8N1L9 274 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 L3MBTL4Q8NA19 623 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 DTD2Q96FN9 168 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 OR6C1Q96RD1 312 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 CPPED1Q9BRF8 314 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 BCO1Q9HAY6 547 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 SLCO1B1Q9Y6L6 691 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 PMS2P1A4D2B8 440 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 UMAD1C9J7I0 102 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 H0YGG7 62 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 AIFM1O95831 613 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 HCCSP53701 268 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 MLF2Q15773 248 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 MDGA1Q8NFP4 955 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 OR6M1Q8NGM8 313 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 SCARB1Q8WTV0 552 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 RPUSD4Q96CM3 377 aaKnown RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 CDCA3Q99618 268 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 IL17CQ9P0M4 197 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 PPP1R3CQ9UQK1 317 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 ATP23Q9Y6H3 246 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 TRBV4-1A0A0J9YWV2 114 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 CTSAP10619 480 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 ADRA2CP18825 462 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 EIF1P41567 113 aaKnown RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 AKR1C3P42330 323 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 ERVFC1P60507 584 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 RPS16P62249 146 aaKnown RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 REEP5Q00765 189 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 HNRNPA1L2Q32P51 320 aaKnown RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 ACOT6Q3I5F7 207 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 DLK2Q6UY11 383 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 TMUB2Q71RG4 321 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 SLC46A1Q96NT5 459 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 SLC25A21Q9BQT8 299 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 CHRDL1Q9BU40 450 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 COMMD5Q9GZQ3 224 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 UCK1Q9HA47 277 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 A3GALT2U3KPV4 340 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 NUP188Q5SRE5 1749 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 A0A0U1RQS6 177 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 GOSR1O95249 250 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 PIPP12273 146 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 GPX3P22352 226 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 ARNTP27540 789 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 OR2B11Q5JQS5 317 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 PLPP7Q8NBV4 271 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 GJC3Q8NFK1 279 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 OR2T6Q8NHC8 308 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 NTMT1Q9BV86 223 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 NKX6-2Q9C056 277 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-201ENST00000302528 PIGMQ9H3S5 423 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 FBXO34Q9NWN3 711 aa9.57□□□□□ -0.88
CLIP1-201ENST00000302528 ANKUB1A6NFN9 424 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 TMEM200CA6NKL6 621 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 HCRTR1O43613 425 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 UTS2O95399 124 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 PDGFAP04085 211 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 S100A8P05109 93 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 ATXN1LP0C7T5 689 aaKnown RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 SPI1P17947 270 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 HOXD13P35453 343 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 CCR6P51684 374 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 HBA1P69905 142 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms