RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CALCBP10092 127 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 MAPK3P27361 379 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-204ENST00000300862 GUCA2AQ02747 115 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 PLCXD2Q0VAA5 305 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 BIKQ13323 160 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 BTN1A1Q13410 526 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 MELKQ14680 651 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 ACKR1Q16570 336 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 NHLRC3Q5JS37 347 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 HLA-DQA1Q5Y7H0 255 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 LANCL3Q6ZV70 420 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 SYT13Q7L8C5 426 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 OR52B4Q8NGK2 314 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 GPR148Q8TDV2 347 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 TSEN15Q8WW01 171 aaKnown RBP11.64□□□□□ -0.55
HIF3A-204ENST00000300862 ZNF69Q9UC07 566 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 CA14Q9ULX7 337 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 MFSD2BA6NFX1 497 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 RGS11O94810 467 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 MPZL1O95297 269 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 ECDO95905 644 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-204ENST00000300862 RAB40ALP0C0E4 278 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 FOLR1P15328 257 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 GALNSP34059 522 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 CSNK1EP49674 416 aaKnown RBP11.64□□□□□ -0.55
HIF3A-204ENST00000300862 AP3S2P59780 193 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 TSPAN5P62079 268 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 CFHR1Q03591 330 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 ARSKQ6UWY0 536 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 BIVMQ86UB2 503 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 UXS1Q8NBZ7 420 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 OR4D10Q8NGI6 311 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 RAB40AQ8WXH6 277 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 ZDHHC12Q96GR4 267 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 C4orf45Q96LM5 186 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 CCNL2Q96S94 520 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-204ENST00000300862 NPAS1Q99742 590 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 PTDSS2Q9BVG9 487 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 SDHAF2Q9NX18 166 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 AKAP7Q9P0M2 348 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-204ENST00000300862 KIF25Q9UIL4 384 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 MKL2Q9ULH7 1088 aa11.64□□□□□ -0.55
HIF3A-204ENST00000300862 CNTRLQ7Z7A1 2325 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 H3BMH7 237 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 ZNF254O75437 659 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 CD27P26842 260 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 ABCD3P28288 659 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 EPHA4P54764 986 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 OPCMLQ14982 345 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 KIF26BQ2KJY2 2108 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 TUSC1Q2TAM9 212 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 EMC4Q5J8M3 183 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 OR7E24Q6IFN5 339 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 OTOSQ8NHW6 89 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 CXorf58Q96LI9 332 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 MS4A7Q9GZW8 240 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-204ENST00000300862 MGAT4CQ9UBM8 478 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 B9D1Q9UPM9 204 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 FER1L5A0AVI2 2057 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 ASCC3Q8N3C0 2202 aaKnown RBP11.63□□□□□ -0.55
HIF3A-204ENST00000300862 TRAV36DV7A0A075B6V5 113 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 TRBV5-7A0A0A0MS05 114 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 TMEM212A6NML5 194 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 ACOT7O00154 380 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 SUSD5O60279 629 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 IGF2P01344 180 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 ITGA5P08648 1049 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 HLA-DOBP13765 273 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 CTLA4P16410 223 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 CXCL2P19875 107 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 IL11P20809 199 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 INSM1Q01101 510 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-204ENST00000300862 SQSTM1Q13501 440 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 ELAVL1Q15717 326 aaKnown RBP11.63□□□□□ -0.55
HIF3A-204ENST00000300862 PCGF3Q3KNV8 242 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 PLPP7Q8NBV4 271 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 DUSP19Q8WTR2 217 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 THAP3Q8WTV1 239 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-204ENST00000300862 ST8SIA4Q92187 359 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 DCBLD2Q96PD2 775 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 WWTR1Q9GZV5 400 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 MRPL22Q9NWU5 206 aaKnown RBP11.63□□□□□ -0.55
HIF3A-204ENST00000300862 MYEF2Q9P2K5 600 aaKnown RBP11.63□□□□□ -0.55
HIF3A-204ENST00000300862 MRTO4Q9UKD2 239 aaKnown RBP11.63□□□□□ -0.55
HIF3A-204ENST00000300862 MMACHCQ9Y4U1 282 aa11.63□□□□□ -0.55
HIF3A-204ENST00000300862 TUBAL3A6NHL2 446 aa11.62□□□□□ -0.55
HIF3A-204ENST00000300862 METTL12A8MUP2 240 aa11.62□□□□□ -0.55
HIF3A-204ENST00000300862 TSPAN2O60636 221 aa11.62□□□□□ -0.55
HIF3A-204ENST00000300862 GLSO94925 669 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-204ENST00000300862 OR6A2O95222 327 aa11.62□□□□□ -0.55
HIF3A-204ENST00000300862 GP1BBP13224 206 aa11.62□□□□□ -0.55
HIF3A-204ENST00000300862 POU3F2P20265 443 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-204ENST00000300862 IGFBP4P22692 258 aa11.62□□□□□ -0.55
HIF3A-204ENST00000300862 UBE2MP61081 183 aaKnown RBP11.62□□□□□ -0.55
HIF3A-204ENST00000300862 OC90Q02509 493 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-204ENST00000300862 EGR3Q06889 387 aa11.62□□□□□ -0.55
HIF3A-204ENST00000300862 MFGE8Q08431 387 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-204ENST00000300862 C14orf28Q4W4Y0 310 aa11.62□□□□□ -0.55
HIF3A-204ENST00000300862 ASPHD2Q6ICH7 369 aa11.62□□□□□ -0.55
HIF3A-204ENST00000300862 NHLRC1Q6VVB1 395 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms