RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SIRPB1O00241 398 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 NME2P1O60361 137 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TGM1P22735 817 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RIPPLY1Q0D2K3 151 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 NAXDQ8IW45 347 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LRRC56Q8IYG6 542 aaPredicted RBP12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 HEYLQ9NQ87 328 aaPredicted RBP12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TMEM221A6NGB7 291 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SEMG1P04279 462 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CR2P20023 1033 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RPS19P39019 145 aaKnown RBP12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RAB11AP62491 216 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLC43A2Q8N370 569 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 L3MBTL4Q8NA19 623 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 UBTD2Q8WUN7 234 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR11A1Q9GZK7 315 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GAB2Q9UQC2 676 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PCYT1BQ9Y5K3 369 aaPredicted RBP12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LRIT2A6NDA9 550 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLC35E2P0CK97 266 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PCSK6P29122 969 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LGALS4P56470 323 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 DEFB108BQ8NET1 73 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TRIB1Q96RU8 372 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GINS3Q9BRX5 216 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ARV1Q9H2C2 271 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TRAF3IP2O43734 574 aaPredicted RBP12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ADAM23O75077 832 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 NOVP48745 357 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MRPL19P49406 292 aaKnown RBP12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 BTG2P78543 158 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZNF92Q03936 586 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ADGRE4PQ86SQ3 457 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FUNDC1Q8IVP5 155 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 NT5DC2Q9H857 520 aa12.45□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZNF732B4DXR9 585 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TMX2-CTNND1H3BSU7 103 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LGI1O95970 557 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CYB561P49447 251 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MAP2K6P52564 334 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZMAT1Q5H9K5 638 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FAM71E1Q6IPT2 247 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GDPD3Q7L5L3 318 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MDGA2Q7Z553 956 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 NAA40Q86UY6 237 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR52H1Q8NGJ2 320 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ADAM19Q9H013 955 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 THAP10Q9P2Z0 257 aaPredicted RBP12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 BCORP1Q8N888 145 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SIAEQ9HAT2 523 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MED17Q9NVC6 651 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 M0R082 166 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TNFSF11O14788 317 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FAM157BP0CG42 384 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ADPRHP54922 357 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CLVS2Q5SYC1 327 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR10K2Q6IF99 312 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ITPKCQ96DU7 683 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 REEP6Q96HR9 211 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 UBQLN3Q9H347 655 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 NTN4Q9HB63 628 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR2W5A6NFC9 320 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLCO2B1O94956 709 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TFAP2AP05549 437 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 HSD17B7P56937 341 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RACK1P63244 317 aaKnown RBP12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR8G1Q15617 311 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RSPO2Q6UXX9 243 aaPredicted RBP12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PELI3Q8N2H9 469 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TVP23CQ96ET8 276 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLC35A4Q96G79 324 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TXN2Q99757 166 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TMEM231Q9H6L2 316 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FGF22Q9HCT0 170 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OBP2AQ9NY56 170 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLC5A6Q9Y289 635 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ANKRD12Q6UB98 2062 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 A0A1B0GX78 115 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LINC01553A4QN01 128 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TLCD2A6NGC4 264 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 M0R1B8 84 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GLCEO94923 617 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TMUB2Q71RG4 321 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MISPQ8IVT2 679 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR1J2Q8NGS2 313 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 C2CD4CQ8TF44 421 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MITD1Q8WV92 249 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FER1L6-AS2Q96M78 137 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MBOAT4Q96T53 435 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FAM103A1Q9BTL3 118 aaKnown RBP12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PTTG3PQ9NZH4 202 aa12.44□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR10A3P58181 314 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 HBG1P69891 147 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 HBG2P69892 147 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZNF385BQ569K4 471 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 BPIFCQ8NFQ6 507 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ORAI1Q96D31 301 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 NGBQ9NPG2 151 aa12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 EXOSC3Q9NQT5 275 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ASB1Q9Y576 335 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms