RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 OR2M7Q8NG81 312 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 KCNE4Q8WWG9 221 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 TMEM203Q969S6 136 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 MRPL48Q96GC5 212 aaKnown RBP13.9□□□□□ -0.18
LSM6-201ENST00000296581 TSPAN10Q9H1Z9 355 aaPredicted RBP13.9□□□□□ -0.18
LSM6-201ENST00000296581 MED29Q9NX70 200 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 KLHL13Q9P2N7 655 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 TVP23AA6NH52 213 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 GJE1A6NN92 205 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 SLC16A7O60669 478 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 CTLA4P16410 223 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 CD53P19397 219 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 CRABP1P29762 137 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 FGF9P31371 208 aaPredicted RBP13.89□□□□□ -0.19
LSM6-201ENST00000296581 FABP5Q01469 135 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 SRSF6Q13247 344 aaKnown RBP13.89□□□□□ -0.19
LSM6-201ENST00000296581 ZNF684Q5T5D7 378 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 YRDCQ86U90 279 aaKnown RBP13.89□□□□□ -0.19
LSM6-201ENST00000296581 UEVLDQ8IX04 471 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 FAM83FQ8NEG4 500 aaPredicted RBP13.89□□□□□ -0.19
LSM6-201ENST00000296581 OR14L1PQ8NHC6 308 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 ST6GAL2Q96JF0 529 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 DMRTB1Q96MA1 342 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 OXGR1Q96P68 337 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 TM9SF2Q99805 663 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 TTYH2Q9BSA4 534 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 PLA2G3Q9NZ20 509 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 KIAA1549Q9HCM3 1950 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 CNTRLQ7Z7A1 2325 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 LINC00854A0A1B0GVQ3 168 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 NKX2-8O15522 239 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 PLPP2O43688 288 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 TRAF3IP2O43734 574 aaPredicted RBP13.89□□□□□ -0.19
LSM6-201ENST00000296581 B3GALNT1O75752 331 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 GALP22466 123 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 DDOSTP39656 456 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 TOMM20Q15388 145 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 TP53I3Q53FA7 332 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 SPATC1Q76KD6 591 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.89□□□□□ -0.19
LSM6-201ENST00000296581 MDS2Q8NDY4 140 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 PELI1Q96FA3 418 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 KLHL15Q96M94 604 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 INTS14Q96SY0 518 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 GON7Q9BXV9 100 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 KCNN2Q9H2S1 579 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 TIGARQ9NQ88 270 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 ACOXLQ9NUZ1 547 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 A3GALT2U3KPV4 340 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 CUL9Q8IWT3 2517 aa13.89□□□□□ -0.19
LSM6-201ENST00000296581 A0A0J9YW62 118 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 METTL15A6NJ78 407 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 ATP6V1G2-DDX39BF2Z307 99 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 EIF1BO60739 113 aaKnown RBP13.88□□□□□ -0.19
LSM6-201ENST00000296581 HLA-DPB1P04440 258 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 GAAP10253 952 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 BIDP55957 195 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 CRTC2Q53ET0 693 aaPredicted RBP13.88□□□□□ -0.19
LSM6-201ENST00000296581 LURAP1LQ8IV03 231 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 SNX33Q8WV41 574 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 RNF170Q96K19 258 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 TTTY10Q9BZA0 68 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 NXF2Q9GZY0 626 aaKnown RBP13.88□□□□□ -0.19
LSM6-201ENST00000296581 RNF32Q9H0A6 362 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 RERGLQ9H628 205 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 WDR76Q9H967 626 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 ST6GALNAC2Q9UJ37 374 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 RASD1Q9Y272 281 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 DMXL1Q9Y485 3027 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 OR5H15A6NDH6 313 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 PRR32B1ATL7 298 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 DNPH1O43598 174 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 RAMP1O60894 148 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 WT1P19544 449 aaPredicted RBP13.88□□□□□ -0.19
LSM6-201ENST00000296581 KLK2P20151 261 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 CSNK2A1P68400 391 aaPredicted RBP13.88□□□□□ -0.19
LSM6-201ENST00000296581 DMKNQ6E0U4 476 aaPredicted RBP13.88□□□□□ -0.19
LSM6-201ENST00000296581 TMEM225Q6GV28 225 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 DNM1P34Q6PK57 102 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 GDPD3Q7L5L3 318 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 SULF2Q8IWU5 870 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 MFRPQ9BY79 579 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 MRPL13Q9BYD1 178 aaKnown RBP13.88□□□□□ -0.19
LSM6-201ENST00000296581 HES7Q9BYE0 225 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 KLHDC2Q9Y2U9 406 aa13.88□□□□□ -0.19
LSM6-201ENST00000296581 CEP250Q9BV73 2442 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 CTDSP2O14595 271 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 MAGEB4O15481 346 aaPredicted RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 OGG1O15527 345 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 GPANK1O95872 356 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 GDF1P27539 372 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 GBX2P52951 348 aaPredicted RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 MFAP5Q13361 173 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 ETFDHQ16134 617 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 WIPI1Q5MNZ9 446 aaPredicted RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 C22orf42Q6IC83 251 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 HDDC2Q7Z4H3 204 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 UBQLNLQ8IYU4 475 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 OR6N2Q8NGY6 317 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 SLC39A7Q92504 469 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms