RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PRAMEF4O60810 478 aa11.71□□□□□ -0.54
PTCD1-201ENST00000292478 TCN2P20062 427 aa11.71□□□□□ -0.54
PTCD1-201ENST00000292478 MCCD1P59942 119 aaPredicted RBP11.71□□□□□ -0.54
PTCD1-201ENST00000292478 HTR4Q13639 388 aa11.71□□□□□ -0.54
PTCD1-201ENST00000292478 TMEM99Q8N816 258 aa11.71□□□□□ -0.54
PTCD1-201ENST00000292478 OR5T1Q8NG75 326 aa11.71□□□□□ -0.54
PTCD1-201ENST00000292478 PCED1AQ9H1Q7 454 aa11.71□□□□□ -0.54
PTCD1-201ENST00000292478 S1PR5Q9H228 398 aa11.71□□□□□ -0.54
PTCD1-201ENST00000292478 CALHM2Q9HA72 323 aa11.71□□□□□ -0.54
PTCD1-201ENST00000292478 OR14J1Q9UGF5 321 aa11.71□□□□□ -0.54
PTCD1-201ENST00000292478 A0A0A6YYD5 115 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 H0Y8X5 98 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 I6L893 689 aaPredicted RBP11.7□□□□□ -0.54
PTCD1-201ENST00000292478 AGPAT2O15120 278 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 SELEP16581 610 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 SLC22A25Q6T423 547 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 TDHQ8IZJ6 230 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 SEMA6DQ8NFY4 1073 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 IKZF5Q9H5V7 419 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 FRG2CA6NGY1 282 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 BET1O15155 118 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 GPX5O75715 221 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 ST6GAL1P15907 406 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 PCSK6P29122 969 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 TLE4Q04727 773 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 DOCK1Q14185 1865 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 C9orf135Q5VTT2 229 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 DND1Q8IYX4 353 aaKnown RBP11.7□□□□□ -0.54
PTCD1-201ENST00000292478 RNF141Q8WVD5 230 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 YIPF6Q96EC8 236 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 KCNJ15Q99712 375 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 TCEAL7Q9BRU2 100 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 BCO1Q9HAY6 547 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 SLC23A2Q9UGH3 650 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 PCDHB10Q9UN67 800 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 SHOXO15266 292 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 DOK2O60496 412 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 HIST1H1CP16403 213 aaKnown RBP11.7□□□□□ -0.54
PTCD1-201ENST00000292478 S100A11P31949 105 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 GABRA2P47869 451 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 RAB4BP61018 213 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 DYRK1AQ13627 763 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 TBC1D28Q2M2D7 210 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 HYAL4Q2M3T9 481 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.7□□□□□ -0.54
PTCD1-201ENST00000292478 ANGPTL5Q86XS5 388 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 DYNC2LI1Q8TCX1 351 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 LIPHQ8WWY8 451 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 ACOXLQ9NUZ1 547 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 COPS3Q9UNS2 423 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 PIGLQ9Y2B2 252 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 LILRA5A6NI73 299 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 IMPA2O14732 288 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 STK17BO94768 372 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 AKR7A3O95154 331 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 ETHE1O95571 254 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 B4GALNT1Q00973 533 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 OXA1LQ15070 435 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 CPNE4Q96A23 557 aaPredicted RBP11.7□□□□□ -0.54
PTCD1-201ENST00000292478 SSX3Q99909 188 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 CCR2P41597 374 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 SUMO3P55854 103 aaPredicted RBP11.7□□□□□ -0.54
PTCD1-201ENST00000292478 HRH4Q9H3N8 390 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 C19orf12Q9NSK7 152 aa11.7□□□□□ -0.54
PTCD1-201ENST00000292478 ZNF346Q9UL40 294 aaKnown RBP11.7□□□□□ -0.54
PTCD1-201ENST00000292478 IDSB3KWA1 339 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 SGCEO43556 437 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 F2RL1P55085 397 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 HEPHL1Q6MZM0 1159 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 RBMS3Q6XE24 437 aaKnown RBP11.69□□□□□ -0.54
PTCD1-201ENST00000292478 LGI3Q8N145 548 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 OR4D6Q8NGJ1 314 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 APH1AQ96BI3 265 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 TMEM43Q9BTV4 400 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 SPACA1Q9HBV2 294 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 A0A087WZY1 265 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 CTXN2P0C2S0 81 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 PPP2CBP62714 309 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 PPP2CAP67775 309 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 ZNF266Q14584 549 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 PDLIM3Q53GG5 364 aaPredicted RBP11.69□□□□□ -0.54
PTCD1-201ENST00000292478 PLPP7Q8NBV4 271 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 HSD17B8Q92506 261 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 SLC7A6Q92536 515 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 FBXL2Q9UKC9 423 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 FADS1O60427 444 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 GMDSO60547 372 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 RGS11O94810 467 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 THBS3P49746 956 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 HTD2P86397 168 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 TPBGQ13641 420 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 OR1M1Q8NGA1 313 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 KCNE4Q8WWG9 221 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 HAS2Q92819 552 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 RBMXL1Q96E39 390 aaKnown RBP11.69□□□□□ -0.54
PTCD1-201ENST00000292478 BTF3L4Q96K17 158 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 PDCD1LG2Q9BQ51 273 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 NRSN2Q9GZP1 204 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 UBE2ZQ9H832 354 aaPredicted RBP11.69□□□□□ -0.54
PTCD1-201ENST00000292478 POMT2Q9UKY4 750 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms