RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 KLRF1Q9NZS2 232 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 A0A1W2PNR3 127 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 PRSS37A4D1T9 235 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 CENPBD1B2RD01 187 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 PSMA6P60900 246 aaKnown RBP14.97□□□□□ -0.01
VPS54-201ENST00000272322 TNK1Q13470 666 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 ANGPT1Q15389 498 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 SLC22A10Q63ZE4 541 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 ZNF440Q8IYI8 595 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 ZNF680Q8NEM1 530 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 CCDC120Q96HB5 630 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 OR6C1Q96RD1 312 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 APMAPQ9HDC9 416 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 MRTO4Q9UKD2 239 aaKnown RBP14.97□□□□□ -0.01
VPS54-201ENST00000272322 RBBP9O75884 186 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 CD3DP04234 171 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 CAMK2DQ13557 499 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 C2orf68Q2NKX9 166 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 DCXRQ7Z4W1 244 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 ELMOD2Q8IZ81 293 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 ACBD4Q8NC06 268 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 OTOSQ8NHW6 89 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 SLC25A44Q96H78 314 aaPredicted RBP14.97□□□□□ -0.01
VPS54-201ENST00000272322 TWSG1Q9GZX9 223 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 TTYH1Q9H313 450 aaPredicted RBP14.97□□□□□ -0.01
VPS54-201ENST00000272322 FRG2CA6NGY1 282 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 I3L521 148 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 P2RY10O00398 339 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 ABHD16AO95870 558 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 OR3A3P47888 321 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 ZNF684Q5T5D7 378 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 EEF1A1P5Q5VTE0 462 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 UNQ9370/PRO34162Q6UXP9 181 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 TEX19Q8NA77 164 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 ELMOD3Q96FG2 381 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 OR2M2Q96R28 347 aa14.97□□□□□ -0.01
VPS54-201ENST00000272322 TRAV36DV7A0A075B6V5 113 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 FXYD6-FXYD2A0A087WZ82 144 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 ARPC5O15511 151 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 DUX1O43812 170 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 ALOX12BO75342 701 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 C4orf46Q504U0 113 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 SFRP5Q5T4F7 317 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 FAM69AQ5T7M9 428 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 TIGD3Q6B0B8 471 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 CD163Q86VB7 1156 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 BPHLQ86WA6 291 aaPredicted RBP14.96□□□□□ -0.01
VPS54-201ENST00000272322 ZNF227Q86WZ6 799 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 OR4S1Q8NGB4 309 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 FXYD6Q9H0Q3 95 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 DHDHQ9UQ10 334 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 POLR1DQ9Y2S0 133 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 TNRC18O15417 2968 aaPredicted RBP14.96□□□□□ -0.01
VPS54-201ENST00000272322 EP300Q09472 2414 aaPredicted RBP14.96□□□□□ -0.01
VPS54-201ENST00000272322 C7orf66A4D0T2 115 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 GABARAPH6UMI1 98 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 MBTPS2O43462 519 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 GAAP10253 952 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 SRFP11831 508 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 LCN1P31025 176 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 CDAP32320 146 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 DHPSP49366 369 aaPredicted RBP14.96□□□□□ -0.01
VPS54-201ENST00000272322 GRK1Q15835 563 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 LIN54Q6MZP7 749 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 RTN4RL2Q86UN3 420 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 PLXDC1Q8IUK5 500 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 EXD3Q8N9H8 876 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 CHST4Q8NCG5 386 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 ZNF248Q8NDW4 579 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 OR4C16Q8NGL9 310 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 C4orf45Q96LM5 186 aa14.96□□□□□ -0.01
VPS54-201ENST00000272322 CLEC4MQ9H2X3 399 aaPredicted RBP14.96□□□□□ -0.01
VPS54-201ENST00000272322 DOCK7Q96N67 2140 aa14.96□□□□□ -0.02
VPS54-201ENST00000272322 MPC2O95563 127 aa14.96□□□□□ -0.02
VPS54-201ENST00000272322 BGLAPP02818 100 aa14.96□□□□□ -0.02
VPS54-201ENST00000272322 RPL27P61353 136 aaKnown RBP14.96□□□□□ -0.02
VPS54-201ENST00000272322 LRRTM1Q86UE6 522 aa14.96□□□□□ -0.02
VPS54-201ENST00000272322 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.96□□□□□ -0.02
VPS54-201ENST00000272322 TNFAIP8L1Q8WVP5 186 aa14.96□□□□□ -0.02
VPS54-201ENST00000272322 HAVCR1Q96D42 359 aa14.96□□□□□ -0.02
VPS54-201ENST00000272322 PTDSS2Q9BVG9 487 aa14.96□□□□□ -0.02
VPS54-201ENST00000272322 ZNF436Q9C0F3 470 aaPredicted RBP14.96□□□□□ -0.02
VPS54-201ENST00000272322 LAT2Q9GZY6 243 aa14.96□□□□□ -0.02
VPS54-201ENST00000272322 LILRA5A6NI73 299 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 ZNF823P16415 610 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 ZNF28P17035 718 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 POU3F2P20265 443 aaPredicted RBP14.95□□□□□ -0.02
VPS54-201ENST00000272322 MNDAP41218 407 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 ATXN7L3Q14CW9 347 aaPredicted RBP14.95□□□□□ -0.02
VPS54-201ENST00000272322 FAM71CQ8NEG0 241 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 OR7G1Q8NGA0 311 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 OR1N1Q8NGS0 311 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 FAM3DQ96BQ1 224 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 DCBLD2Q96PD2 775 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 SLC19A3Q9BZV2 496 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 SLC22A11Q9NSA0 550 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 LRP12Q9Y561 859 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 TCRBV16S1A1N1A0A5B0 115 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 ZNF250P15622 560 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 KLK2P20151 261 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms