RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 OR10A5Q9H207 317 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 MYO9BQ13459 2157 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 LOC100509620A0A075B734 347 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 PNPP00491 289 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 PLGP00747 810 aaPredicted RBP24.85■■□□□ 1.57
CBX4-201ENST00000269397 ASAH2BP0C7U1 165 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 HPGDP15428 266 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 WBP2NLQ6ICG8 309 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 DGAT2Q96PD7 388 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 MNTQ99583 582 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 SPTBN5Q9NRC6 3674 aaKnown RBP24.84■■□□□ 1.57
CBX4-201ENST00000269397 LOC100289279A0A1B0GTE1 492 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 OR10K2Q6IF99 312 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 MED25Q71SY5 747 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 AVL9Q8NBF6 648 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 GPX8Q8TED1 209 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 BADQ92934 168 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 SEH1LQ96EE3 360 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 SLC19A3Q9BZV2 496 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 GDE1Q9NZC3 331 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 CGGBP1Q9UFW8 167 aaPredicted RBP24.84■■□□□ 1.57
CBX4-201ENST00000269397 GPR3P46089 330 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 STARP49675 285 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 KLHL26Q53HC5 615 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 OR1J4Q8NGS1 313 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 NUP210LQ5VU65 1888 aa24.84■■□□□ 1.57
CBX4-201ENST00000269397 OR5H14A6NHG9 310 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 ZNF432O94892 652 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 ZNF28P17035 718 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 RASGEF1BQ0VAM2 473 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 TAF13Q15543 124 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 LIN54Q6MZP7 749 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 BPIFCQ8NFQ6 507 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 ZNF416Q9BWM5 594 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 PSMD4P55036 377 aaKnown RBP24.83■■□□□ 1.57
CBX4-201ENST00000269397 SQSTM1Q13501 440 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 C1QL3Q5VWW1 255 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 MDGA2Q7Z553 956 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 TAAR8Q969N4 342 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 GAS2L1Q99501 681 aaPredicted RBP24.83■■□□□ 1.57
CBX4-201ENST00000269397 NPAS1Q99742 590 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 SLC25A32Q9H2D1 315 aa24.83■■□□□ 1.57
CBX4-201ENST00000269397 SLC17A2O00624 439 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 MGMTP16455 207 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 PBX2P40425 430 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 ZNF169Q14929 603 aaPredicted RBP24.82■■□□□ 1.56
CBX4-201ENST00000269397 NKPD1Q17RQ9 610 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 ELSPBP1Q96BH3 223 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 TWSG1Q9GZX9 223 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 RASL12Q9NYN1 266 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 PLCL2Q9UPR0 1127 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 PMS2P2O95744 297 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 RENP00797 406 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 MC2RQ01718 297 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 EGR3Q06889 387 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 GLYATL3Q5SZD4 288 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 PDCD10Q9BUL8 212 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 PRTFDC1Q9NRG1 225 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 TDRD6O60522 2096 aaKnown RBP24.82■■□□□ 1.56
CBX4-201ENST00000269397 DOCK8Q8NF50 2099 aa24.82■■□□□ 1.56
CBX4-201ENST00000269397 EIF4E2O60573 245 aaKnown RBP24.81■■□□□ 1.56
CBX4-201ENST00000269397 ATPAF1Q5TC12 328 aaPredicted RBP24.81■■□□□ 1.56
CBX4-201ENST00000269397 EEF1A1P5Q5VTE0 462 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 OR4S1Q8NGB4 309 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 ZNF563Q8TA94 476 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 PELOQ9BRX2 385 aaKnown RBP24.81■■□□□ 1.56
CBX4-201ENST00000269397 C1orf198Q9H425 327 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 PCDHB16Q9NRJ7 776 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 A0A1W2PQF6 199 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 DCDC2BA2VCK2 349 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 KCNAB3O43448 404 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 PNMTP11086 282 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 HOXB2P14652 356 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 NTSR1P30989 418 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 SCAND1P57086 179 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 DHRS2Q13268 280 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 OTOSQ8NHW6 89 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 SLC37A2Q8TED4 501 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 CCDC107Q8WV48 283 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 FGF14Q92915 247 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 ZNF471Q9BX82 626 aaPredicted RBP24.81■■□□□ 1.56
CBX4-201ENST00000269397 BARX1Q9HBU1 254 aaPredicted RBP24.81■■□□□ 1.56
CBX4-201ENST00000269397 CLDN16Q9Y5I7 305 aa24.81■■□□□ 1.56
CBX4-201ENST00000269397 EYSQ5T1H1 3165 aa24.8■■□□□ 1.56
CBX4-201ENST00000269397 TPPPO94811 219 aa24.8■■□□□ 1.56
CBX4-201ENST00000269397 UBBP0CG47 229 aa24.8■■□□□ 1.56
CBX4-201ENST00000269397 UBCP0CG48 685 aaKnown RBP24.8■■□□□ 1.56
CBX4-201ENST00000269397 APEHP13798 732 aaKnown RBP24.8■■□□□ 1.56
CBX4-201ENST00000269397 TACR3P29371 465 aa24.8■■□□□ 1.56
CBX4-201ENST00000269397 TAS2R19P59542 299 aa24.8■■□□□ 1.56
CBX4-201ENST00000269397 ACTBP60709 375 aa24.8■■□□□ 1.56
CBX4-201ENST00000269397 RPS27AP62979 156 aaKnown RBP24.8■■□□□ 1.56
CBX4-201ENST00000269397 UBA52P62987 128 aaKnown RBP24.8■■□□□ 1.56
CBX4-201ENST00000269397 ACTG1P63261 375 aa24.8■■□□□ 1.56
CBX4-201ENST00000269397 MFGE8Q08431 387 aaPredicted RBP24.8■■□□□ 1.56
CBX4-201ENST00000269397 MOGAT2Q3SYC2 334 aa24.8■■□□□ 1.56
CBX4-201ENST00000269397 MANEAQ5SRI9 462 aa24.8■■□□□ 1.56
CBX4-201ENST00000269397 JMJD6Q6NYC1 403 aaPredicted RBP24.8■■□□□ 1.56
CBX4-201ENST00000269397 ZNF321PQ8N8H1 164 aa24.8■■□□□ 1.56
CBX4-201ENST00000269397 NOP16Q9Y3C1 178 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms