RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TACR3P29371 465 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 SELENOPP49908 381 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 SNRPNP63162 240 aaKnown RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 HNF4GQ14541 408 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 SSX2Q16385 188 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 IAH1Q2TAA2 248 aaPredicted RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 GPR139Q6DWJ6 353 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 MRGPRX3Q96LB0 322 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 OR10A5Q9H207 317 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF304Q9HCX3 659 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 GMEB2Q9UKD1 530 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 PRELID3BQ9Y3B1 194 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 LOC100289279A0A1B0GTE1 492 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 TRIM64BA6NI03 449 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 P2RY10O00398 339 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 TRAPPC6AO75865 159 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 NSA2O95478 260 aaKnown RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 JMJD7P0C870 316 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 MMP15P51511 669 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 ADPRHP54922 357 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 RPL19P84098 196 aaKnown RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 POU3F1Q03052 451 aaPredicted RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 GSG1Q2KHT4 349 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 ARHGAP11BQ3KRB8 267 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF595Q8IYB9 648 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 GABRG1Q8N1C3 465 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 SORCS2Q96PQ0 1159 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 NRTNQ99748 197 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 GAREM1Q9H706 876 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 WDR76Q9H967 626 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 RBBP6Q7Z6E9 1792 aaKnown RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 SERTM1A2A2V5 107 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 PRKNO60260 465 aaPredicted RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 NTN1O95631 604 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 THBS1P07996 1170 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 CD14P08571 375 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 P2RX1P51575 399 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 MECP2P51608 486 aaKnown RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 AFF3P51826 1226 aaKnown RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 PCBP3P57721 371 aaKnown RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 KIAA0141Q14154 515 aaPredicted RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 SLC36A2Q495M3 483 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 HIST2H3PS2Q5TEC6 136 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 TMEM71Q6P5X7 295 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF793Q6ZN11 406 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF547Q8IVP9 402 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 C17orf47Q8NEP4 570 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 OR51Q1Q8NH59 317 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 SLC37A2Q8TED4 501 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 DIO2Q92813 273 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 TUBG2Q9NRH3 451 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 NUDT21O43809 227 aaKnown RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 GZMMP51124 257 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 YPEL5P62699 121 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 CLINT1Q14677 625 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 MELKQ14680 651 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 HLXQ14774 488 aaPredicted RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 ACOT7LQ6ZUV0 252 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 OR11H7Q8NGC8 314 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 PPP1R1CQ8WVI7 109 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 PHYHIPQ92561 330 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 CDCA3Q99618 268 aaPredicted RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 SLC25A32Q9H2D1 315 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 IFT22Q9H7X7 185 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 FAM212BQ9NTI7 297 aaPredicted RBP10.57□□□□□ -0.72
VPS33A-201ENST00000267199 FBXO4Q9UKT5 387 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 FAM230AA0A1W2PPH8 454 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 GLCEO94923 617 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 HPXP02790 462 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 OR4E1P0C645 316 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 CNR1P21554 472 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 GPNMBQ14956 572 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 FXNQ16595 210 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 DPY19L2P2Q6ZN68 376 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 C19orf47Q8N9M1 422 aaKnown RBP10.56□□□□□ -0.72
VPS33A-201ENST00000267199 RAB3CQ96E17 227 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 BMFQ96LC9 184 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 HHIPQ96QV1 700 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 EVA1AQ9H8M9 152 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 TIMM8BQ9Y5J9 83 aaPredicted RBP10.56□□□□□ -0.72
VPS33A-201ENST00000267199 SCN3AQ9NY46 2000 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 LANCL1O43813 399 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 ITGB2P05107 769 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 DUSP8Q13202 625 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 CDKN3Q16667 212 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 MAMSTRQ6ZN01 415 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 MED25Q71SY5 747 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 NAA40Q86UY6 237 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 ADGRG3Q86Y34 549 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF695Q8IW36 515 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 OR1M1Q8NGA1 313 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 HAS2Q92819 552 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 YIPF5Q969M3 257 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 MAP3K3Q99759 626 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 RBM24Q9BX46 236 aaKnown RBP10.56□□□□□ -0.72
VPS33A-201ENST00000267199 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.56□□□□□ -0.72
VPS33A-201ENST00000267199 FBXL4Q9UKA2 621 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 CA14Q9ULX7 337 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 PLXNB2O15031 1838 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 PARP14Q460N5 1801 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms