RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 DPYSL5Q9BPU6 564 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 NMNAT2Q9BZQ4 307 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 MMP25Q9NPA2 562 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 KANTRA0A1W2PQU2 76 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 EEF1E1-BLOC1S5C9J1V9 151 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 SLC25A12O75746 678 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 HLA-AP01891 365 aaKnown RBP11.22□□□□□ -0.61
CHMP3-201ENST00000263856 HNRNPA2B1P22626 353 aaKnown RBP11.22□□□□□ -0.61
CHMP3-201ENST00000263856 KIR2DL1P43626 348 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-201ENST00000263856 KIR3DL2P43630 455 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 ADAM8P78325 824 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 MC2RQ01718 297 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 ZNF273Q14593 569 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 TOMM34Q15785 309 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-201ENST00000263856 SMAD2Q15796 467 aaKnown RBP11.22□□□□□ -0.61
CHMP3-201ENST00000263856 TMEM88Q6PEY1 159 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 CHRDL2Q6WN34 429 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 LINC00114Q6XXX2 140 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 TMEM185AQ8NFB2 350 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 PXT1Q8NFP0 134 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 OR51A2Q8NGJ7 313 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 SLC25A28Q96A46 364 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 POLE3Q9NRF9 147 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 DOCK8Q8NF50 2099 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 EFCAB7A8K855 629 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 C17orf105B2RV13 164 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 CYB5AP00167 134 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 CXCR1P25024 350 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 DNASE1L1P49184 302 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 WBP2NLQ6ICG8 309 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 MCATQ8IVS2 390 aaKnown RBP11.21□□□□□ -0.61
CHMP3-201ENST00000263856 BPIFB2Q8N4F0 458 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 TAAR8Q969N4 342 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 RNF166Q96A37 237 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-201ENST00000263856 TOE1Q96GM8 510 aaKnown RBP11.21□□□□□ -0.61
CHMP3-201ENST00000263856 CMTM3Q96MX0 182 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 SLC38A3Q99624 504 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 AIFM2Q9BRQ8 373 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 SFXN1Q9H9B4 322 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 BRWD1Q9NSI6 2320 aa11.21□□□□□ -0.61
CHMP3-201ENST00000263856 PCNX3Q9H6A9 2034 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 C13orf42A0A1B0GVH6 325 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 FAM74A7A6NL05 159 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 TMEM212A6NML5 194 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 TNFSF14O43557 240 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 B3GALNT1O75752 331 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 MPZL1O95297 269 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 PNPP00491 289 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 DCNP07585 359 aaKnown RBP11.21□□□□□ -0.62
CHMP3-201ENST00000263856 CD34P28906 385 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 CDNFQ49AH0 187 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 FAM74A3Q4VXF1 159 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 C3orf33Q6P1S2 294 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 ANKRD16Q6P6B7 361 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 CMBLQ96DG6 245 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 SLC25A44Q96H78 314 aaPredicted RBP11.21□□□□□ -0.62
CHMP3-201ENST00000263856 SHARPINQ9H0F6 387 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 CENPMQ9NSP4 180 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 PLCL2Q9UPR0 1127 aa11.21□□□□□ -0.62
CHMP3-201ENST00000263856 LINC01565O15544 149 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 WNT11O96014 354 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 GNALP38405 381 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 EPHA4P54764 986 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 AKIRIN2Q53H80 203 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 DMRTC1Q5HYR2 192 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 RTL10Q7L3V2 364 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 CDC20BQ86Y33 519 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 LINC00346Q8IVM7 164 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 DEFB119Q8N690 84 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 OR52H1Q8NGJ2 320 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 OR6N1Q8NGY5 312 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 VRK1Q99986 396 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 LMF2Q9BU23 707 aaKnown RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 ADAT1Q9BUB4 502 aaKnown RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 PBX4Q9BYU1 374 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 IFT46Q9NQC8 304 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 EXOSC3Q9NQT5 275 aaKnown RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 ASF1BQ9NVP2 202 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 TAS2R8Q9NYW2 309 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 GDE1Q9NZC3 331 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 CKLFQ9UBR5 152 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 B9D1Q9UPM9 204 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 F5H0A9 414 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 SRPX2O60687 465 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 AKR1C4P17516 323 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 ALOX5APP20292 161 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 EGR4Q05215 589 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 MFGE8Q08431 387 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF141Q15928 474 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 OR52W1Q6IF63 320 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 FAM122BQ7Z309 247 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 OR5M9Q8NGP3 310 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 C15orf40Q8WUR7 153 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 C4orf45Q96LM5 186 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 MAP3K3Q99759 626 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 SLC6A7Q99884 636 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 POTEKPQ9BYX7 375 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 NXF5Q9H1B4 397 aaKnown RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 SLC39A1Q9NY26 324 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms