RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 OTPQ5XKR4 325 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 LRFN4Q6PJG9 635 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 EGFL6Q8IUX8 553 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 RBMXL3Q8N7X1 1067 aaKnown RBP20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 ABHD3Q8WU67 409 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 PELI1Q96FA3 418 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 CHCHD6Q9BRQ6 235 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 DCUN1D5Q9BTE7 237 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 KCNG2Q9UJ96 466 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 FOXD3Q9UJU5 478 aaPredicted RBP20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 STUB1Q9UNE7 303 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 SIRT4Q9Y6E7 314 aaPredicted RBP20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 IGKV3D-15A0A087WSY6 115 aa20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 A0A1B0GVC2 190 aa20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 QDPRP09417 244 aa20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 CELP19835 753 aa20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 C3AR1Q16581 482 aa20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 TBR1Q16650 682 aa20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 TEX30Q5JUR7 227 aa20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 GDPGP1Q6ZNW5 385 aa20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 PNPLA2Q96AD5 504 aa20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 INTS12Q96CB8 462 aaKnown RBP20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 TAAR6Q96RI8 345 aa20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 MCTS1Q9ULC4 181 aaKnown RBP20.3■□□□□ 0.84
SMARCB1-201ENST00000263121 LOC100506127A0A0U1RQW1 187 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 SPARCP09486 303 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 LAP3P28838 519 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 GABRA5P31644 462 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 NTF4P34130 210 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 RPS25P62851 125 aaKnown RBP20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 EGR3Q06889 387 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 SOWAHCQ53LP3 525 aaPredicted RBP20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 PHYHD1Q5SRE7 291 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 C10orf128Q5T292 105 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 PLEKHG7Q6ZR37 379 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 KCTD20Q7Z5Y7 419 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 SIAH3Q8IW03 269 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 C20orf196Q8IYI0 205 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 OR6N1Q8NGY5 312 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 NDNFQ8TB73 568 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 CENPOQ9BU64 300 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 GNG8Q9UK08 70 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 RAXQ9Y2V3 346 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 ZNF407Q9C0G0 2248 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 LRRTM2O43300 516 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 ZNF823P16415 610 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 TGFBR1P36897 503 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 UCNP55089 124 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 TMPRSS3P57727 454 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 LRRC69Q6ZNQ3 347 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 ZNF454Q8N9F8 522 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 THEM6Q8WUY1 208 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 C11orf40Q8WZ69 217 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 TMEM45BQ96B21 275 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 ZNF775Q96BV0 537 aaPredicted RBP20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 AMELYQ99218 206 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 PLSCR2Q9NRY7 297 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 ACOXLQ9NUZ1 547 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 MRM2Q9UI43 246 aaKnown RBP20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 ST6GALNAC2Q9UJ37 374 aa20.29■□□□□ 0.84
SMARCB1-201ENST00000263121 PLPP2O43688 288 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 SULT1C4O75897 302 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 AQP8O94778 261 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 ABHD16AO95870 558 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 ZNF182P17025 639 aaPredicted RBP20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 GBX2P52951 348 aaPredicted RBP20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 SLC18B1Q6NT16 456 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 RPUSD3Q6P087 351 aaKnown RBP20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 CD200R1LQ6Q8B3 271 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 FNDC9Q8TBE3 224 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 ASB17Q8WXJ9 295 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 TRMT61AQ96FX7 289 aaKnown RBP20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 TSC22D3Q99576 134 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 GRIP1Q9Y3R0 1128 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 UGT2A1Q9Y4X1 527 aa20.28■□□□□ 0.84
SMARCB1-201ENST00000263121 A0A1W2PPL8 197 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 METTL15A6NJ78 407 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 PSMD9O00233 223 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 AQP7O14520 342 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 OGG1O15527 345 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 CD53P19397 219 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 DMKNQ6E0U4 476 aaPredicted RBP20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 RPTNQ6XPR3 784 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 AAED1Q7RTV5 226 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 TMEM203Q969S6 136 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 RNF166Q96A37 237 aaPredicted RBP20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 ABHD17AQ96GS6 310 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 TTYH2Q9BSA4 534 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 PRDM14Q9GZV8 571 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 RNF167Q9H6Y7 350 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 CAMK2AQ9UQM7 478 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 B3GNT3Q9Y2A9 372 aa20.27■□□□□ 0.84
SMARCB1-201ENST00000263121 GPR171O14626 319 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 SLC43A1O75387 559 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 WISP2O76076 250 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 OR8G3PP0DMU2 310 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 UGT2B10P36537 528 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 SIRPAP78324 504 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 KCNMB1Q16558 191 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms