RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GPX2P18283 190 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 DUSP5Q16690 384 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 ACTBL2Q562R1 376 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 XKR7Q5GH72 579 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 FAM58AQ8N1B3 248 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 ATOH1Q92858 354 aaPredicted RBP11.08□□□□□ -0.64
SMG6-201ENST00000263073 IL23AQ9NPF7 189 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 TRPM3Q9HCF6 1732 aaPredicted RBP11.08□□□□□ -0.64
SMG6-201ENST00000263073 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 CYB5BO43169 146 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 PTHLHP12272 177 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 HTR3AP46098 478 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 SUOXP51687 545 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 SLC7A9P82251 487 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 INSL4Q14641 139 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 HMGN3Q15651 99 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 ZNF239Q16600 458 aaKnown RBP11.08□□□□□ -0.64
SMG6-201ENST00000263073 FAM71E1Q6IPT2 247 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 FAM199XQ6PEV8 388 aaPredicted RBP11.08□□□□□ -0.64
SMG6-201ENST00000263073 LCN15Q6UWW0 184 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 RBMS3Q6XE24 437 aaKnown RBP11.08□□□□□ -0.64
SMG6-201ENST00000263073 OR4A16Q8NH70 328 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 YIPF6Q96EC8 236 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 GPR173Q9NS66 373 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 AKR7A3O95154 331 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 SEMG1P04279 462 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 DUSP3P51452 185 aaPredicted RBP11.07□□□□□ -0.64
SMG6-201ENST00000263073 SELENBP1Q13228 472 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 OR52N1Q8NH53 320 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 FGF13Q92913 245 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 AKIP1Q9NQ31 210 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 PIGBOS1A0A0B4J2F0 54 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 DCTDP32321 178 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 RAB38P57729 211 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 SLC25A35Q3KQZ1 300 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 DPY19L2P2Q6ZN68 376 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 CLEC1AQ8NC01 280 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 ZNF680Q8NEM1 530 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 KCNG3Q8TAE7 436 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 UBTD2Q8WUN7 234 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 LMAN1LQ9HAT1 526 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 AK3Q9UIJ7 227 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 CD207Q9UJ71 328 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 PRAMEF26H0Y7S4 382 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 DVL1O14640 695 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 MRPL33O75394 65 aaKnown RBP11.07□□□□□ -0.64
SMG6-201ENST00000263073 DVL1P1P54792 670 aaPredicted RBP11.07□□□□□ -0.64
SMG6-201ENST00000263073 HTRA3P83110 453 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 OVCH1Q7RTY7 1134 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 OR1E3Q8WZA6 343 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 CTRCQ99895 268 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 SLCO5A1Q9H2Y9 848 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 MCTS1Q9ULC4 181 aaKnown RBP11.07□□□□□ -0.64
SMG6-201ENST00000263073 MOKQ9UQ07 419 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 C17orf112F2Z3M2 114 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 DDAH2O95865 285 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 REEP5Q00765 189 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 MFAP5Q13361 173 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 EDDM3AQ14507 147 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 MSMO1Q15800 293 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 PRTGQ2VWP7 1150 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 CLEC9AQ6UXN8 241 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 DNMT3BQ9UBC3 853 aaKnown RBP11.07□□□□□ -0.64
SMG6-201ENST00000263073 A0A087WUU8 490 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 TRAV20A0A0B4J274 112 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 SOX15O60248 233 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 NTF3P20783 257 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 HOXD11P31277 338 aaPredicted RBP11.07□□□□□ -0.64
SMG6-201ENST00000263073 LIPNQ5VXI9 398 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 Q6ZRG5 221 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 UPRTQ96BW1 309 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 TCTN2Q96GX1 697 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 PLA2G12AQ9BZM1 189 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 TMEM38AQ9H6F2 299 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 GNG12Q9UBI6 72 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 KLK11Q9UBX7 282 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 MUTYHQ9UIF7 546 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 ETV7Q9Y603 341 aa11.07□□□□□ -0.64
SMG6-201ENST00000263073 PLCH1Q4KWH8 1693 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 SSSCA1O60232 199 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 ZNF354AO60765 605 aaPredicted RBP11.06□□□□□ -0.64
SMG6-201ENST00000263073 GUCA2AQ02747 115 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 C19orf47Q8N9M1 422 aaKnown RBP11.06□□□□□ -0.64
SMG6-201ENST00000263073 RAB39BQ96DA2 213 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 ABHD6Q9BV23 337 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 MYOTQ9UBF9 498 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 ASH2LQ9UBL3 628 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 KIR2DL3P43628 341 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 GPR85P60893 370 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 GABREP78334 506 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 MFSD12Q6NUT3 480 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 SLC48A1Q6P1K1 146 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 OR5AS1Q8N127 324 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 RBMXL3Q8N7X1 1067 aaKnown RBP11.06□□□□□ -0.64
SMG6-201ENST00000263073 OR6M1Q8NGM8 313 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 NUDCD2Q8WVJ2 157 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 C10orf90Q96M02 699 aa11.06□□□□□ -0.64
SMG6-201ENST00000263073 PLEKHB1Q9UF11 243 aaPredicted RBP11.06□□□□□ -0.64
SMG6-201ENST00000263073 EXO1Q9UQ84 846 aaKnown RBP11.06□□□□□ -0.64
SMG6-201ENST00000263073 PLSCR5A0PG75 271 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms