RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 TEAD3Q99594 435 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 EMC7Q9NPA0 242 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 PCDHGA3Q9Y5H0 932 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 ZNFX1Q9P2E3 1918 aaKnown RBP12.66□□□□□ -0.38
CDH1-201ENST00000261769 ACHEP22303 614 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 CD34P28906 385 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 SRD5A2P31213 254 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 EIF4EBP2Q13542 120 aaPredicted RBP12.66□□□□□ -0.38
CDH1-201ENST00000261769 SMN1Q16637 294 aaKnown RBP12.66□□□□□ -0.38
CDH1-201ENST00000261769 BEST3Q8N1M1 668 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 RHOXF1Q8NHV9 184 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 STOML3Q8TAV4 291 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 ROBO4Q8WZ75 1007 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 WDR54Q9H977 334 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 SPACA1Q9HBV2 294 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 XRCC2O43543 280 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 CYC1P08574 325 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 CNR1P21554 472 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 ZNF93P35789 620 aaPredicted RBP12.66□□□□□ -0.38
CDH1-201ENST00000261769 EMDP50402 254 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 YBX1P67809 324 aaKnown RBP12.66□□□□□ -0.38
CDH1-201ENST00000261769 ZIC1Q15915 447 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 SPRED3Q2MJR0 410 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 LRRC37A5PQ49AS3 106 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 KDM4DQ6B0I6 523 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 KIRREL2Q6UWL6 708 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 PRSS41Q7RTY9 318 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 PHB2Q99623 299 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 TNFRSF12AQ9NP84 129 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 SDHAF2Q9NX18 166 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 PILRBQ9UKJ0 227 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 PIGLQ9Y2B2 252 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 ASCC3Q8N3C0 2202 aaKnown RBP12.66□□□□□ -0.38
CDH1-201ENST00000261769 BTBD17A6NE02 478 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 M0R135 149 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 AGTR1P30556 359 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 PPP5CP53041 499 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 ACTBL2Q562R1 376 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 ZNF799Q96GE5 643 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 FBXO8Q9NRD0 319 aa12.66□□□□□ -0.38
CDH1-201ENST00000261769 GPR55Q9Y2T6 319 aaPredicted RBP12.66□□□□□ -0.38
CDH1-201ENST00000261769 TRIP11Q15643 1979 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 PRSS37A4D1T9 235 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 ALG1L2C9J202 215 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 BCAS1O75363 584 aaPredicted RBP12.65□□□□□ -0.38
CDH1-201ENST00000261769 EDDM3BP56851 147 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 FGGYQ96C11 551 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 SLAMF6Q96DU3 332 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 GALNT9Q9HCQ5 603 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 ZNF701M0R085 212 aaPredicted RBP12.65□□□□□ -0.38
CDH1-201ENST00000261769 SBK2P0C263 348 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 HOXB3P14651 431 aaPredicted RBP12.65□□□□□ -0.38
CDH1-201ENST00000261769 MC2RQ01718 297 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 LRRC28Q86X40 367 aaPredicted RBP12.65□□□□□ -0.38
CDH1-201ENST00000261769 SULF2Q8IWU5 870 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 DNAJC5GQ8N7S2 189 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 TMEM99Q8N816 258 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 BHLHE23Q8NDY6 225 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 ZNF431Q8TF32 576 aaPredicted RBP12.65□□□□□ -0.38
CDH1-201ENST00000261769 OCSTAMPQ9BR26 566 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 MED29Q9NX70 200 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 NEU3Q9UQ49 428 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 NTNG1Q9Y2I2 539 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 A0A096LPE4 126 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 A0A1B0GTL3 188 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 A0A1W2PPZ6 126 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 OR6C6A6NF89 314 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 CD300LBA8K4G0 201 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 SPINT2O43291 252 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 GALR2O43603 387 aaPredicted RBP12.65□□□□□ -0.38
CDH1-201ENST00000261769 MSMO1Q15800 293 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 LRRC20Q8TCA0 184 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 RNF128Q8TEB7 428 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 RAB3CQ96E17 227 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 GNRHR2Q96P88 292 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 SELENOIQ9C0D9 397 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 QPCTLQ9NXS2 382 aa12.65□□□□□ -0.38
CDH1-201ENST00000261769 CLDN24A6NM45 220 aa12.65□□□□□ -0.39
CDH1-201ENST00000261769 DIO1P49895 249 aa12.65□□□□□ -0.39
CDH1-201ENST00000261769 FAM71CQ8NEG0 241 aa12.65□□□□□ -0.39
CDH1-201ENST00000261769 C7orf50Q9BRJ6 194 aaKnown RBP12.65□□□□□ -0.39
CDH1-201ENST00000261769 RYDENQ9NUL5 291 aaKnown RBP12.65□□□□□ -0.39
CDH1-201ENST00000261769 MGAT4CQ9UBM8 478 aa12.65□□□□□ -0.39
CDH1-201ENST00000261769 TAS2R19P59542 299 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 PRICKLE4Q2TBC4 344 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 OR6M1Q8NGM8 313 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 OR1S1Q8NH92 325 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 TP63Q9H3D4 680 aaPredicted RBP12.64□□□□□ -0.39
CDH1-201ENST00000261769 FKBP14Q9NWM8 211 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 C5orf49A4QMS7 147 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 CAPNS1P04632 268 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 SPI1P17947 270 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 BLVRBP30043 206 aaPredicted RBP12.64□□□□□ -0.39
CDH1-201ENST00000261769 MESP2Q0VG99 397 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 SHBQ15464 509 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 OR5D18Q8NGL1 313 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 ATF6BQ99941 703 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 TMEM43Q9BTV4 400 aa12.64□□□□□ -0.39
CDH1-201ENST00000261769 MBD1Q9UIS9 605 aaPredicted RBP12.64□□□□□ -0.39
CDH1-201ENST00000261769 ZNF732B4DXR9 585 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms