RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 GPR55Q9Y2T6 319 aaPredicted RBP13.15□□□□□ -0.3
CUX2-201ENST00000261726 A0A1B0GWA3 101 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 ABCD4O14678 606 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 SLC16A6O15403 523 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 PAPLNO95428 1278 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 ELAVL4P26378 380 aaKnown RBP13.15□□□□□ -0.3
CUX2-201ENST00000261726 KDM4DQ6B0I6 523 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 SSX7Q7RTT5 188 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 ADGRE4PQ86SQ3 457 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 OR52I1Q8NGK6 324 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 LILRB4Q8NHJ6 448 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 PFN4Q8NHR9 129 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 EPHX3Q9H6B9 360 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 SLC35D1Q9NTN3 355 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 ATP23Q9Y6H3 246 aa13.15□□□□□ -0.3
CUX2-201ENST00000261726 AKAP11Q9UKA4 1901 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 TMEM265A0A087WTH1 108 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 CT45A10P0DMU9 189 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 HOXD9P28356 352 aaPredicted RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 ZNF133P52736 654 aaPredicted RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 EXOSC2Q13868 293 aaKnown RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 MRPL43Q8N983 215 aaKnown RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 DPF1Q92782 380 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 TMEM235A6NFC5 223 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 DBPQ10586 325 aaPredicted RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 LKAAEAR1Q8TD35 194 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 APH1AQ96BI3 265 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 C14orf79Q96F83 325 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 PKMYT1Q99640 499 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 EIF1BO60739 113 aaKnown RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 T-ENOLP0DO92 83 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 RPL13AP40429 203 aaKnown RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 MRPS21P82921 87 aaKnown RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 RFLNAQ6ZTI6 216 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 EDAQ92838 391 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 EGLN1Q9GZT9 426 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 RNF150Q9ULK6 438 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 MRPS2Q9Y399 296 aaKnown RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 SCG5P05408 212 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 FABP1P07148 127 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 GLB1P16278 677 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 GDF7Q7Z4P5 450 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 CELF2-AS1Q8N7Q2 184 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 SHISA4Q96DD7 197 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 BTF3L4Q96K17 158 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 CPPED1Q9BRF8 314 aaPredicted RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 MED17Q9NVC6 651 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 RAB22AQ9UL26 194 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 COA3Q9Y2R0 106 aaPredicted RBP13.14□□□□□ -0.31
CUX2-201ENST00000261726 NME2P1O60361 137 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 TCRBP04435 133 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 CYB561P49447 251 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 C5orf46Q6UWT4 87 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 DPY19L2P2Q6ZN68 376 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 NRSN2Q9GZP1 204 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 DEFB127Q9H1M4 99 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 MUTYHQ9UIF7 546 aa13.14□□□□□ -0.31
CUX2-201ENST00000261726 ATP6V1G2-DDX39BF2Z307 99 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 TERTO14746 1132 aaKnown RBP13.13□□□□□ -0.31
CUX2-201ENST00000261726 ZNF749O43361 778 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 CR2P20023 1033 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 MAP2K6P52564 334 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 FCN2Q15485 313 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 NXNL2Q5VZ03 156 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 OR2T11Q8NH01 316 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 ZBED3Q96IU2 234 aaPredicted RBP13.13□□□□□ -0.31
CUX2-201ENST00000261726 GPR78Q96P69 363 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 ATOH8Q96SQ7 321 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 DHRS9Q9BPW9 319 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 HES7Q9BYE0 225 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 NTN4Q9HB63 628 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 MTNR1BP49286 362 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 CMPK2Q5EBM0 449 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 SNX11Q9Y5W9 270 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 IGKV6-21A0A0C4DH24 114 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 NRG2O14511 850 aaPredicted RBP13.13□□□□□ -0.31
CUX2-201ENST00000261726 ALPLP05186 524 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 ADH4P08319 380 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 SRMP19623 302 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 APEX1P27695 318 aaKnown RBP13.13□□□□□ -0.31
CUX2-201ENST00000261726 SEMA6DQ8NFY4 1073 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 RHOXF1Q8NHV9 184 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 ADAM29Q9UKF5 820 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 SH2D7A6NKC9 451 aaPredicted RBP13.13□□□□□ -0.31
CUX2-201ENST00000261726 PPP1R2P9O14990 202 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 OR5G3P0C626 314 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 ACKR1Q16570 336 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 HOXC13P31276 330 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 KCNRGQ8N5I3 272 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 SIRT6Q8N6T7 355 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 DEFB108BQ8NET1 73 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 SEMA6CQ9H3T2 930 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 CXorf36Q9H7Y0 433 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 ATP13A2Q9NQ11 1180 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 FGF21Q9NSA1 209 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 SLC5A10A0PJK1 596 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 LGI3Q8N145 548 aa13.13□□□□□ -0.31
CUX2-201ENST00000261726 KCTD12Q96CX2 325 aaKnown RBP13.13□□□□□ -0.31
CUX2-201ENST00000261726 HCFC2Q9Y5Z7 792 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms