RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PON3Q15166 354 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 C14orf28Q4W4Y0 310 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 GLT8D1Q68CQ7 371 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 PUSL1Q8N0Z8 303 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 C12orf45Q8N5I9 185 aaPredicted RBP9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 SPACA7Q96KW9 195 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 FAM117AQ9C073 453 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 TCF7L1Q9HCS4 588 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 MEPEQ9NQ76 525 aaPredicted RBP9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 SOHLH2Q9NX45 425 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 MBD2Q9UBB5 411 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 CHRNA9Q9UGM1 479 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 TNFSF18Q9UNG2 199 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 TRAV27A0A087WT01 109 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 A0A1B0GTI1 187 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 MAGEB4O15481 346 aaPredicted RBP9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 HCRTR1O43613 425 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 HEXAP06865 529 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 GKN3PP0CG01 181 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 PTHLHP12272 177 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 CFPP27918 469 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 GPR3P46089 330 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 NXPH1P58417 271 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 STARD6P59095 220 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 POLR2GP62487 172 aaKnown RBP eCLIP9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 LTBQ06643 244 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 SNTB1Q13884 538 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 Q499Y3 187 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 C4orf46Q504U0 113 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 LY6G6FQ5SQ64 297 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 STPG1Q5TH74 334 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 ULK3Q6PHR2 472 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 SKA3Q8IX90 412 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 BEST3Q8N1M1 668 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 FRMD1Q8N878 549 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 OR52E2Q8NGJ4 325 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 OR51A7Q8NH64 312 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 GLYATL2Q8WU03 294 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 TNFRSF13CQ96RJ3 184 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 PDCD10Q9BUL8 212 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 ZNF426Q9BUY5 554 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 EXO5Q9H790 373 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 FBXO34Q9NWN3 711 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 C2orf42Q9NWW7 574 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 DNAJB12Q9NXW2 375 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 CA14Q9ULX7 337 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 ERVK-19Q9WJR5 959 aa9.79□□□□□ -0.84
CHRNA1-201ENST00000261007 A0A1B0GWA3 101 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 RHPN2P1A8MT19 583 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 NPIPB9F8W1W9 429 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 IMPA2O14732 288 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 SIGLEC5O15389 551 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 ZNF432O94892 652 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 CSRP1P21291 193 aaKnown RBP9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 PSMB10P40306 273 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 FNTBP49356 437 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 SIGLEC14Q08ET2 396 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 FHL1Q13642 323 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 FAM74A1Q5RGS3 127 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 C11orf87Q6NUJ2 197 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 C3orf33Q6P1S2 294 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 ANKRD16Q6P6B7 361 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 ACOT7LQ6ZUV0 252 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 LRRTM1Q86UE6 522 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 RGP1Q92546 391 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 MMABQ96EY8 250 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 SLC25A21Q9BQT8 299 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 TTTY10Q9BZA0 68 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 TMEM185BQ9H7F4 350 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 MKKSQ9NPJ1 570 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 WNT16Q9UBV4 365 aa9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 ZNF629Q9UEG4 869 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 NOSIPQ9Y314 301 aaKnown RBP9.78□□□□□ -0.84
CHRNA1-201ENST00000261007 NPIPA5A0A0B4J1W7 369 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 TRBV5-5A0A0J9YX44 114 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 GGT3PA6NGU5 568 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 OR5H14A6NHG9 310 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 TMEM150CB9EJG8 249 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 NPIPA7E9PJI5 369 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 GPR31O00270 319 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 FGF16O43320 207 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 ZFPL1O95159 310 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 SNAPINO95295 136 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 TACSTD2P09758 323 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 NPIPA8P0DM63 369 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 GTF2F2P13984 249 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 NAA10P41227 235 aaPredicted RBP9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 PPM1FP49593 454 aaPredicted RBP9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 ARHGDIBP52566 201 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 UBE2MP61081 183 aaKnown RBP9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 TOMM20Q15388 145 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 VWA2Q5GFL6 755 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 ALG10BQ5I7T1 473 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 ZNF684Q5T5D7 378 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 AVPI1Q5T686 147 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 ZNF813Q6ZN06 617 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 DGAT2L6Q6ZPD8 337 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 ZNF227Q86WZ6 799 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms