RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 OR4E1P0C645 316 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 DUX4L2P0CJ85 424 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 DUX4L3P0CJ86 424 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 DUX4L4P0CJ87 422 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 DUX4L5P0CJ88 424 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 DUX4L6P0CJ89 424 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 DUX4L7P0CJ90 424 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 CTRB1P17538 263 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 BLOC1S1P78537 153 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 WDR38Q5JTN6 314 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 CTRB2Q6GPI1 263 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 DPY19L2P2Q6ZN68 376 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 TTLL10Q6ZVT0 673 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF101Q8IZC7 436 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF321PQ8N8H1 164 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 NPRL2Q8WTW4 380 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 INTS14Q96SY0 518 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 OR11A1Q9GZK7 315 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 HRH4Q9H3N8 390 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 APMAPQ9HDC9 416 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 DUX4Q9UBX2 424 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 KIF25Q9UIL4 384 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 MAFFQ9ULX9 164 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 EMC9Q9Y3B6 208 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 COL4A3Q01955 1670 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 OBSL1O75147 1896 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 KIF26AQ9ULI4 1882 aaPredicted RBP10.85□□□□□ -0.67
USHBP1-201ENST00000252597 CLDN4O14493 209 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 CD2P06729 351 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 SLC2A1P11166 492 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 ATP1B3P54709 279 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 TMEM200AQ86VY9 491 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF584Q8IVC4 421 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 CDH26Q8IXH8 852 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 GABRG1Q8N1C3 465 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 OR1S1Q8NH92 325 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 CCDC74AQ96AQ1 378 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 LPAR4Q99677 370 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 NUDT22Q9BRQ3 303 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 CPNE7Q9UBL6 633 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 STEAP1Q9UHE8 339 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 ZDBF2Q9HCK1 2354 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 CTAG2O75638 210 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 LYPD3O95274 346 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 CD14P08571 375 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 IL13RA1P78552 427 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 SLC9A3R2Q15599 337 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 CHRDL2Q6WN34 429 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 CA13Q8N1Q1 262 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 FAM71CQ8NEG0 241 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 THAP6Q8TBB0 222 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 PPP1R1CQ8WVI7 109 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 ZBTB8AQ96BR9 441 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 DPYSL5Q9BPU6 564 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 C12orf10Q9HB07 376 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 MTCL1Q9Y4B5 1905 aaKnown RBP10.85□□□□□ -0.67
USHBP1-201ENST00000252597 TRANK1O15050 2925 aa10.85□□□□□ -0.67
USHBP1-201ENST00000252597 TMEM272A0A1B0GTI8 110 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 LMX1BO60663 402 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 PVALBP20472 110 aaPredicted RBP10.84□□□□□ -0.67
USHBP1-201ENST00000252597 S100A10P60903 97 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 BAMBIQ13145 260 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 TOMM34Q15785 309 aaPredicted RBP10.84□□□□□ -0.67
USHBP1-201ENST00000252597 EXOSC6Q5RKV6 272 aaKnown RBP10.84□□□□□ -0.67
USHBP1-201ENST00000252597 PARM1Q6UWI2 310 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 Q6ZSR6 202 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 ESX1Q8N693 406 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 SLC37A2Q8TED4 501 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 TMED6Q8WW62 240 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 POTEKPQ9BYX7 375 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 SLC17A4Q9Y2C5 497 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 C2orf74A8MZ97 194 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 GSTZ1O43708 216 aaPredicted RBP10.84□□□□□ -0.67
USHBP1-201ENST00000252597 GALR3O60755 368 aaPredicted RBP10.84□□□□□ -0.67
USHBP1-201ENST00000252597 HTR3BO95264 441 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 ADH1BP00325 375 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 CSF1P09603 554 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 CD53P19397 219 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 GPM6BQ13491 265 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 RBM39Q14498 530 aaKnown RBP10.84□□□□□ -0.67
USHBP1-201ENST00000252597 GAB4Q2WGN9 574 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 RNASE10Q5GAN6 216 aaKnown RBP10.84□□□□□ -0.67
USHBP1-201ENST00000252597 C9orf50Q5SZB4 431 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 HLA-DQA1Q5Y7H0 255 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 NPSR1Q6W5P4 371 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 BCORP1Q8N888 145 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 OR52H1Q8NGJ2 320 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 OR1S2Q8NGQ3 325 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 OR13C3Q8NGS6 347 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 DCUN1D4Q92564 292 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 MTIF3Q9H2K0 278 aaKnown RBP10.84□□□□□ -0.67
USHBP1-201ENST00000252597 SEC61A2Q9H9S3 476 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 MSRAQ9UJ68 235 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 MRPS33Q9Y291 106 aaKnown RBP10.84□□□□□ -0.67
USHBP1-201ENST00000252597 C17orf105B2RV13 164 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 H7C417 338 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 GLI4P10075 376 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 MOGAT2Q3SYC2 334 aa10.84□□□□□ -0.67
USHBP1-201ENST00000252597 C16orf47Q6ZP98 133 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms