RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CCDC74BQ96LY2 380 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 COLQQ9Y215 455 aaPredicted RBP14.19□□□□□ -0.14
LRFN1-201ENST00000248668 PCDHGA9Q9Y5G4 932 aaKnown RBP14.19□□□□□ -0.14
LRFN1-201ENST00000248668 PRRC2CQ9Y520 2896 aaKnown RBP14.19□□□□□ -0.14
LRFN1-201ENST00000248668 A0A1W2PQD3 144 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 PATE3B3GLJ2 98 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 EMP2P54851 167 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 HLA-BQ31612 363 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 WDR38Q5JTN6 314 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 PLPP5Q8NEB5 264 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 SYNPRQ8TBG9 265 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 CLDN23Q96B33 292 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 PRO3102Q9H379 93 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 RARRES3Q9UL19 164 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 SRPK3Q9UPE1 567 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 COA3Q9Y2R0 106 aaPredicted RBP14.19□□□□□ -0.14
LRFN1-201ENST00000248668 IGHV5-10-1A0A0J9YXX1 117 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 AIPO00170 330 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 TMEM65Q6PI78 240 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 LINC00346Q8IVM7 164 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 EMC6Q9BV81 110 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 CACNG6Q9BXT2 260 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 SAV1Q9H4B6 383 aaPredicted RBP14.19□□□□□ -0.14
LRFN1-201ENST00000248668 MRPL22Q9NWU5 206 aaKnown RBP14.19□□□□□ -0.14
LRFN1-201ENST00000248668 OCIAD1Q9NX40 245 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 KLK11Q9UBX7 282 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 AHCTF1Q8WYP5 2266 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 ANXA2P2A6NMY6 339 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 OR4C45A6NMZ5 311 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 ANXA2P07355 339 aaKnown RBP14.18□□□□□ -0.14
LRFN1-201ENST00000248668 CCKBRP32239 447 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 GDNFP39905 211 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 RPL35P42766 123 aaKnown RBP14.18□□□□□ -0.14
LRFN1-201ENST00000248668 EMC4Q5J8M3 183 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 CRB3Q9BUF7 120 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 C1QTNF6Q9BXI9 259 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 SCPEP1Q9HB40 452 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 OR5V1Q9UGF6 321 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 RCE1Q9Y256 329 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 LY6G6EA0A0G2JKS1 128 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 PLPP3O14495 311 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 EIF1AYO14602 144 aaKnown RBP14.18□□□□□ -0.14
LRFN1-201ENST00000248668 PNPP00491 289 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 HLA-DMAP28067 261 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 KIR3DL2P43630 455 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 RRAS2P62070 204 aaPredicted RBP14.18□□□□□ -0.14
LRFN1-201ENST00000248668 MRPL28Q13084 256 aaKnown RBP14.18□□□□□ -0.14
LRFN1-201ENST00000248668 NR0B2Q15466 257 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 FCN2Q15485 313 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 UBE2NLQ5JXB2 153 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 KMT5CQ86Y97 462 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 OR52I2Q8NH67 350 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 OTOSQ8NHW6 89 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 AKAP1Q92667 903 aaKnown RBP eCLIP14.18□□□□□ -0.14
LRFN1-201ENST00000248668 NXPE2Q96DL1 559 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 COMMD4Q9H0A8 199 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 SEMA5BQ9P283 1151 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 FKBP7Q9Y680 259 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 U3KQA8 63 aa14.18□□□□□ -0.14
LRFN1-201ENST00000248668 TRABD2BA6NFA1 517 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 IFNGR1P15260 489 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 EIF1AXP47813 144 aaKnown RBP14.17□□□□□ -0.14
LRFN1-201ENST00000248668 ACY1Q03154 408 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 FOXF1Q12946 379 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 CORO6Q6QEF8 472 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 CARFQ8N187 725 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 ZBTB44Q8NCP5 570 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 CREB3L1Q96BA8 519 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 C5orf34Q96MH7 638 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 SLITRK2Q9H156 845 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 PDCD5O14737 125 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 NPIPB7O75200 414 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 OR2J2O76002 312 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 TCRBP04435 133 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 DCDP81605 110 aaKnown RBP14.17□□□□□ -0.14
LRFN1-201ENST00000248668 POU3F1Q03052 451 aaPredicted RBP14.17□□□□□ -0.14
LRFN1-201ENST00000248668 CFAP77Q6ZQR2 320 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 ZNF767PQ75MW2 155 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 PLCZ1Q86YW0 608 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 GLB1L2Q8IW92 636 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 OR10G3Q8NGC4 313 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 DPAGT1Q9H3H5 408 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 TXNIPQ9H3M7 391 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 GAREM1Q9H706 876 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 MRPL39Q9NYK5 338 aaKnown RBP14.17□□□□□ -0.14
LRFN1-201ENST00000248668 EIF3KQ9UBQ5 218 aaKnown RBP14.17□□□□□ -0.14
LRFN1-201ENST00000248668 FLVCR2Q9UPI3 526 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 NUP210LQ5VU65 1888 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 OR6C76A6NM76 312 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 ADAM10O14672 748 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 IGF2P01344 180 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 DPP4P27487 766 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 MMP15P51511 669 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 MFGE8Q08431 387 aaPredicted RBP14.17□□□□□ -0.14
LRFN1-201ENST00000248668 SNTB2Q13425 540 aaKnown RBP14.17□□□□□ -0.14
LRFN1-201ENST00000248668 EIF2B1Q14232 305 aaKnown RBP14.17□□□□□ -0.14
LRFN1-201ENST00000248668 TMEM255AQ5JRV8 349 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 KRT77Q7Z794 578 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 NFAM1Q8NET5 270 aaPredicted RBP14.17□□□□□ -0.14
LRFN1-201ENST00000248668 FBXW5Q969U6 566 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms