RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 LINC01553A4QN01 128 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 TSFMP43897 325 aaKnown RBP15.28■□□□□ 0.04
SGPP1-201ENST00000247225 ATP1B3P54709 279 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 MOGAT2Q3SYC2 334 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 NKAIN2Q5VXU1 208 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 Q6ZSR6 202 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 BIVMQ86UB2 503 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 LRRTM1Q86UE6 522 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 CBLN2Q8IUK8 224 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 ESX1Q8N693 406 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 GPR119Q8TDV5 335 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 ZNF524Q96C55 264 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 SLC25A44Q96H78 314 aaPredicted RBP15.28■□□□□ 0.04
SGPP1-201ENST00000247225 SHARPINQ9H0F6 387 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 SYNDIG1Q9H7V2 258 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 XRCC3O43542 346 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 PRAMEF2O60811 474 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 UPK3AO75631 287 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 WISP1O95388 367 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 NAGAP17050 411 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 MAPK3P27361 379 aaPredicted RBP15.28■□□□□ 0.04
SGPP1-201ENST00000247225 TDGQ13569 410 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 KIR2DS3Q14952 304 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 SPICQ8N5J4 248 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 NUDCD2Q8WVJ2 157 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 MRPS24Q96EL2 167 aaKnown RBP15.28■□□□□ 0.04
SGPP1-201ENST00000247225 OR11A1Q9GZK7 315 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 SLC6A15Q9H2J7 730 aa15.28■□□□□ 0.04
SGPP1-201ENST00000247225 SCDO00767 359 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 CTDSPLO15194 276 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 SLC25A12O75746 678 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 NKX2-2O95096 273 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 FARS2O95363 451 aaKnown RBP15.27■□□□□ 0.04
SGPP1-201ENST00000247225 PNPP00491 289 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 CXCR1P25024 350 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 OR1D4P47884 311 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 EPHA4P54764 986 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 SLC16A9Q7RTY1 509 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 PRSS35Q8N3Z0 413 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 SLC37A2Q8TED4 501 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 GAS2L1Q99501 681 aaPredicted RBP15.27■□□□□ 0.04
SGPP1-201ENST00000247225 DPYSL5Q9BPU6 564 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 PARP12Q9H0J9 701 aaKnown RBP15.27■□□□□ 0.04
SGPP1-201ENST00000247225 OR10A5Q9H207 317 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 HPF1Q9NWY4 346 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 AUP1Q9Y679 476 aa15.27■□□□□ 0.04
SGPP1-201ENST00000247225 A0A0B4J2A0 478 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 METTL12A8MUP2 240 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 C2orf74A8MZ97 194 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 ZNF736B4DX44 427 aaPredicted RBP15.27■□□□□ 0.03
SGPP1-201ENST00000247225 ATG12O94817 140 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 MNX1P50219 401 aaPredicted RBP15.27■□□□□ 0.03
SGPP1-201ENST00000247225 GPM6BQ13491 265 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 CYYR1Q96J86 154 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 SHPKQ9UHJ6 478 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 EMC9Q9Y3B6 208 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 CSF1P09603 554 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 RPS4Y1P22090 263 aaKnown RBP15.27■□□□□ 0.03
SGPP1-201ENST00000247225 PPP1R1CQ8WVI7 109 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 GSKIPQ9P0R6 139 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 MSRAQ9UJ68 235 aa15.27■□□□□ 0.03
SGPP1-201ENST00000247225 OR4C45A6NMZ5 311 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 ARRB1P49407 418 aaPredicted RBP15.26■□□□□ 0.03
SGPP1-201ENST00000247225 ARFIP1P53367 373 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 PRPS1P60891 318 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 ELFN2Q5R3F8 820 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 HAGHLQ6PII5 290 aaPredicted RBP15.26■□□□□ 0.03
SGPP1-201ENST00000247225 UNQ9370/PRO34162Q6UXP9 181 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 TMEM200AQ86VY9 491 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 OR5M9Q8NGP3 310 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 ZNF417Q8TAU3 575 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 MARVELD3Q96A59 401 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 ZBTB8AQ96BR9 441 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 CKLFQ9UBR5 152 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 CLDN4O14493 209 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 WNT11O96014 354 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 SLC35E2P0CK97 266 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 AKR1C3P42330 323 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 MESTQ5EB52 335 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 RTN4RL2Q86UN3 420 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 TAAR8Q969N4 342 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 BMFQ96LC9 184 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.26■□□□□ 0.03
SGPP1-201ENST00000247225 ICAM5Q9UMF0 924 aa15.26■□□□□ 0.03
SGPP1-201ENST00000247225 SNRPGP15A8MWD9 76 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 CALCBP10092 127 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 ALG11Q2TAA5 492 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 C16orf47Q6ZP98 133 aaPredicted RBP15.25■□□□□ 0.03
SGPP1-201ENST00000247225 OR1S2Q8NGQ3 325 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 TSPAN32Q96QS1 320 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 IL23AQ9NPF7 189 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 EXOSC3Q9NQT5 275 aaKnown RBP15.25■□□□□ 0.03
SGPP1-201ENST00000247225 C17orf105B2RV13 164 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 OR2A4O95047 310 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 CT45A8P0DMV1 189 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 CT45A9P0DMV2 189 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 NR0B2Q15466 257 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 CT45A2Q5DJT8 189 aa15.25■□□□□ 0.03
SGPP1-201ENST00000247225 SLC36A1Q7Z2H8 476 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms