RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 BHLHE40O14503 412 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ENTPD1P49961 510 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 PRKXP51817 358 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 RIDAP52758 137 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 DLX5P56178 289 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 MESTQ5EB52 335 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 DPY19L4Q7Z388 723 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 OR1J2Q8NGS2 313 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 RNF122Q9H9V4 155 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 AASSQ9UDR5 926 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF629Q9UEG4 869 aaPredicted RBP9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 MEMO1Q9Y316 297 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 EXOSC1Q9Y3B2 195 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ATRXP46100 2492 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZGRF1Q86YA3 2104 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 UPK3AO75631 287 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 LYNP07948 512 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 MYF6P23409 242 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 CDAP32320 146 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ARR3P36575 388 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 HTR5AP47898 357 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ST3GAL4Q11206 333 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC25A35Q3KQZ1 300 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ABLIM2Q6H8Q1 611 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 VWA1Q6PCB0 445 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 BHLHA15Q7RTS1 189 aaPredicted RBP9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF524Q96C55 264 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF582Q96NG8 517 aaPredicted RBP9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 MBOAT4Q96T53 435 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 TEAD3Q99594 435 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ANKRD60Q9BZ19 345 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 BCO1Q9HAY6 547 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 GPR35Q9HC97 309 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF226Q9NYT6 803 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 GRIP1Q9Y3R0 1128 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 TIMM10BQ9Y5J6 103 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 MYO7BQ6PIF6 2116 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 SNRPGP62308 76 aaKnown RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 LRFN4Q6PJG9 635 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 BCDIN3DQ7Z5W3 292 aaKnown RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 BTLAQ7Z6A9 289 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 LHFPL3Q86UP9 236 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 LINC00346Q8IVM7 164 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 CCDC36Q8IYA8 594 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 FAM26EQ8N5C1 309 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 RHOXF1Q8NHV9 184 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 GPX7Q96SL4 187 aaPredicted RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 YTHDF1Q9BYJ9 559 aaKnown RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 PRSS50Q9UI38 385 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 DNAH14Q0VDD8 3507 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 OR6C68A6NDL8 312 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 GNAO1P09471 354 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 HTR1FP30939 366 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 OR3A2P47893 321 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 ENTHD1Q8IYW4 607 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 UBE2FQ969M7 185 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 TMEM45BQ96B21 275 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 USB1Q9BQ65 265 aaKnown RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 NELFAQ9H3P2 528 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 SIAEQ9HAT2 523 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 PLSCR2Q9NRY7 297 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 CLCF1Q9UBD9 225 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 ASH2LQ9UBL3 628 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 COL27A1Q8IZC6 1860 aaPredicted RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 DIDO1Q9BTC0 2240 aaKnown RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 KLK2P20151 261 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 IDH3GP51553 393 aaPredicted RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC25A1P53007 311 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 TPTEP56180 551 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 RPS4XP62701 263 aaKnown RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 NEDD8Q15843 81 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF454Q8N9F8 522 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 TSPAN14Q8NG11 270 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 COMMD4Q9H0A8 199 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 NEK6Q9HC98 313 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 MBD3L4A6NDZ8 208 aaPredicted RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 MBD3L3A6NE82 208 aaPredicted RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 MBD3L5A6NJ08 208 aaPredicted RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF99A8MXY4 864 aaPredicted RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 SS18L1O75177 396 aaPredicted RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 CTLA4P16410 223 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 MALLQ13021 153 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 C12orf73Q69YU5 71 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 DPPA2Q7Z7J5 298 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 ALPK2Q86TB3 2170 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 MBD3L2Q8NHZ7 208 aaPredicted RBP9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 FUZQ9BT04 418 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 WDR76Q9H967 626 aa9.85□□□□□ -0.83
TNFAIP3-201ENST00000237289 NPIPB13A6NJU9 1138 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 NPIPB4C9JG80 1138 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 SGCEO43556 437 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 FZD7O75084 574 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 WISP1O95388 367 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 MT-ND5P03915 603 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 LCATP04180 440 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ACTA2P62736 377 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ACTG2P63267 376 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ADARB1P78563 741 aaKnown RBP9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 RAB40BQ12829 278 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 XKRXQ6PP77 449 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms