RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SMG9Q9H0W8 520 aaKnown RBP7.57□□□□□ -1.2
APOB-201ENST00000233242 GLTPD2A6NH11 291 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 ZNF727A8MUV8 499 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 H3BML4 177 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 M0QZK8 103 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 GGCTO75223 188 aaKnown RBP7.57□□□□□ -1.2
APOB-201ENST00000233242 SFTA3P0C7M3 94 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 RAB38P57729 211 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 ADIPOR2Q86V24 386 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 OR4A16Q8NH70 328 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 LHFPL5Q8TAF8 219 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 SLC39A7Q92504 469 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 DCBLD2Q96PD2 775 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 GPR62Q9BZJ7 368 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 PLSCR3Q9NRY6 295 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 VSX1Q9NZR4 365 aaPredicted RBP7.57□□□□□ -1.2
APOB-201ENST00000233242 CT45A6P0DMU7 189 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 CT45A5P0DMU8 189 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 CT45A7P0DMV0 189 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 CT45A8P0DMV1 189 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 CT45A9P0DMV2 189 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 FCGR2AP12318 317 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 CT45A2Q5DJT8 189 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 CT45A1Q5HYN5 189 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 XAF1Q6GPH4 301 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 GRASPQ7Z6J2 395 aaPredicted RBP7.57□□□□□ -1.2
APOB-201ENST00000233242 CT45A3Q8NHU0 189 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 NMNAT3Q96T66 252 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 EMC9Q9Y3B6 208 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 FCGR2CP31995 323 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 ARRB2P32121 409 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 UBE2G2P60604 165 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 Q3ZCU0 254 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 TMEM184AQ6ZMB5 413 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 UBAC2Q8NBM4 344 aa7.57□□□□□ -1.2
APOB-201ENST00000233242 SEC14L6B5MCN3 397 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 BET1O15155 118 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SOD1P00441 154 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 HSD11B1LQ7Z5J1 315 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 TEAD3Q99594 435 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 C19orf43Q9BQ61 176 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 TXNRD2Q9NNW7 524 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 OR14J1Q9UGF5 321 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 MCTS1Q9ULC4 181 aaKnown RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 SLC5A10A0PJK1 596 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 KLF8O95600 359 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 OR4E1P0C645 316 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 TNFSF4P23510 183 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 VIPR2P41587 438 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ACVR1Q04771 509 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 EXOSC7Q15024 291 aaKnown RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 HNRNPA1L2Q32P51 320 aaKnown RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 OR52W1Q6IF63 320 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SH2D5Q6ZV89 423 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 DOK3Q7L591 496 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 OR4C5Q8NGB2 326 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SMIM7Q9BQ49 75 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 PDCD1LG2Q9BQ51 273 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SCAND1P57086 179 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ZNF836Q6ZNA1 936 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SYT9Q86SS6 491 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 CHST14Q8NCH0 376 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ZFPM2Q8WW38 1151 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 APOBEC3BQ9UH17 382 aaKnown RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 ZNF230Q9UIE0 474 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 MYO5AQ9Y4I1 1855 aaKnown RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 KDM4EB2RXH2 506 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 TNFSF12O43508 249 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 EIF4EP06730 217 aaKnown RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 RRASP10301 218 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 CSF2RBP32927 897 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 DHPSP49366 369 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 FABP5Q01469 135 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 TIGITQ495A1 244 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 GLIPR1L1Q6UWM5 242 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 LMAN1LQ9HAT1 526 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SPATA6Q9NWH7 488 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 NME2P1O60361 137 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 DBHP09172 617 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 NID1P14543 1247 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SLC35A1P78382 337 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 GPM6BQ13491 265 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SOWAHCQ53LP3 525 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 MMP21Q8N119 569 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ATF6BQ99941 703 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 PLEKHF2Q9H8W4 249 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 LHX3Q9UBR4 397 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 TMEM184BQ9Y519 407 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 C4AP0C0L4 1744 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 C4BP0C0L5 1744 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ABHD16AO95870 558 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 EPXP11678 715 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ZNF85Q03923 595 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 MFAP5Q13361 173 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SLC38A6Q8IZM9 456 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 CMTM4Q8IZR5 234 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 BRI3BPQ8WY22 251 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 CIB3Q96Q77 187 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 HNRNPA3P51991 378 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms