RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 A0A1W2PQ72 361 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 HLA-DQA2P01906 255 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 CELA2AP08217 269 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 SPARCP09486 303 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 SOX2P48431 317 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 ZNF41P51814 821 aaPredicted RBP17.15■□□□□ 0.34
YBX3-201ENST00000228251 NKX2-5P52952 324 aaPredicted RBP17.15■□□□□ 0.34
YBX3-201ENST00000228251 BTG1P62324 171 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 ADAM8P78325 824 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 TLE3Q04726 772 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 C19orf57Q0VDD7 668 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 MYBPHQ13203 477 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 ZNF433Q8N7K0 673 aaPredicted RBP17.15■□□□□ 0.34
YBX3-201ENST00000228251 ZNF676Q8N7Q3 588 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 SMIM4Q8WVI0 70 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 LIN7BQ9HAP6 207 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 PLEKHA1Q9HB21 404 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 NEK6Q9HC98 313 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 MOV10Q9HCE1 1003 aaKnown RBP17.15■□□□□ 0.34
YBX3-201ENST00000228251 SERINC1Q9NRX5 453 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 FBXL2Q9UKC9 423 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 HS3ST3B1Q9Y662 390 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 MPZL1O95297 269 aa17.14■□□□□ 0.33
YBX3-201ENST00000228251 FMODQ06828 376 aa17.14■□□□□ 0.33
YBX3-201ENST00000228251 ZNF239Q16600 458 aaKnown RBP17.14■□□□□ 0.33
YBX3-201ENST00000228251 BTBD16Q32M84 506 aa17.14■□□□□ 0.33
YBX3-201ENST00000228251 ASPHD2Q6ICH7 369 aa17.14■□□□□ 0.33
YBX3-201ENST00000228251 ASB18Q6ZVZ8 466 aa17.14■□□□□ 0.33
YBX3-201ENST00000228251 CATSPERDQ86XM0 798 aa17.14■□□□□ 0.33
YBX3-201ENST00000228251 OR52N5Q8NH56 324 aa17.14■□□□□ 0.33
YBX3-201ENST00000228251 ST7LQ8TDW4 575 aa17.14■□□□□ 0.33
YBX3-201ENST00000228251 TMEM106AQ96A25 262 aa17.14■□□□□ 0.33
YBX3-201ENST00000228251 TCF7L1Q9HCS4 588 aa17.14■□□□□ 0.33
YBX3-201ENST00000228251 TRABD2BA6NFA1 517 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 NPIPA5E9PKD4 350 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 CD3GP09693 182 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 MNDAP41218 407 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 SRP9P49458 86 aaKnown RBP17.13■□□□□ 0.33
YBX3-201ENST00000228251 FOXK1P85037 733 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 POU3F1Q03052 451 aaPredicted RBP17.13■□□□□ 0.33
YBX3-201ENST00000228251 MFGE8Q08431 387 aaPredicted RBP17.13■□□□□ 0.33
YBX3-201ENST00000228251 SNTA1Q13424 505 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 KLF9Q13886 244 aaPredicted RBP17.13■□□□□ 0.33
YBX3-201ENST00000228251 KCTD18Q6PI47 426 aaPredicted RBP17.13■□□□□ 0.33
YBX3-201ENST00000228251 DBX2Q6ZNG2 339 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 DND1Q8IYX4 353 aaKnown RBP17.13■□□□□ 0.33
YBX3-201ENST00000228251 THRSPQ92748 146 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 ZNF486Q96H40 463 aaPredicted RBP17.13■□□□□ 0.33
YBX3-201ENST00000228251 RNF170Q96K19 258 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 MRPL13Q9BYD1 178 aaKnown RBP17.13■□□□□ 0.33
YBX3-201ENST00000228251 SLITRK2Q9H156 845 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 MED29Q9NX70 200 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 GPN3Q9UHW5 284 aaPredicted RBP17.13■□□□□ 0.33
YBX3-201ENST00000228251 FBXO4Q9UKT5 387 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 NPIPA1Q9UND3 350 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 LRP12Q9Y561 859 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 ETV7Q9Y603 341 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 PHF3Q92576 2039 aaKnown RBP17.13■□□□□ 0.33
YBX3-201ENST00000228251 WDFY3Q8IZQ1 3526 aa17.13■□□□□ 0.33
YBX3-201ENST00000228251 TTLL8A6PVC2 850 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 H3BML4 177 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 ORC5O43913 435 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 ATP6V1G1O75348 118 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 HRGP04196 525 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 KLK3P07288 261 aaPredicted RBP17.12■□□□□ 0.33
YBX3-201ENST00000228251 GP1BAP07359 652 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 SYPP08247 313 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 CD37P11049 281 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 CLDN12P56749 244 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 SCAND1P57086 179 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 EIF2B1Q14232 305 aaKnown RBP17.12■□□□□ 0.33
YBX3-201ENST00000228251 DNM1P34Q6PK57 102 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 FCRLAQ7L513 359 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 ARMC10Q8N2F6 343 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 TMEM105Q8N8V8 129 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 OR2Y1Q8NGV0 311 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 MR1Q95460 341 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 ULBP3Q9BZM4 244 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 PISDQ9UG56 409 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 SLC22A13Q9Y226 551 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 RPH3AQ9Y2J0 694 aaPredicted RBP17.12■□□□□ 0.33
YBX3-201ENST00000228251 TEX51A0A1B0GUA7 166 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 A8MV72 311 aaPredicted RBP17.12■□□□□ 0.33
YBX3-201ENST00000228251 INMT-MINDY4F8WBC2 141 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 AQP8O94778 261 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 ACP1P24666 158 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 ADH6P28332 368 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 PTH2RP49190 550 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 IFITM2Q01629 132 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 EXT1Q16394 746 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 C3orf33Q6P1S2 294 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 MDGA2Q7Z553 956 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 SIAH3Q8IW03 269 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 M1APQ8TC57 530 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 MIB2Q96AX9 1013 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 SH2D2AQ9NP31 389 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 FOXJ3Q9UPW0 622 aa17.12■□□□□ 0.33
YBX3-201ENST00000228251 PTRH2Q9Y3E5 179 aaKnown RBP17.12■□□□□ 0.33
YBX3-201ENST00000228251 RAB40ALP0C0E4 278 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 ARSBP15848 533 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms