RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 hCG_1809904A0A1W2PP81 198 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 A0A1W2PR64 198 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 A0A1W2PRV1 198 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 A6NLC8 198 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 DOK2O60496 412 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 ADH1BP00325 375 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 CPT2P23786 658 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 RPL4P36578 427 aaKnown RBP12.77□□□□□ -0.36
SF1-201ENST00000227503 POU3F4P49335 361 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 OR2B8PP59922 312 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 PLAURQ03405 335 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 RUNX3Q13761 415 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 ENPP2Q13822 863 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 NKAPLQ5M9Q1 402 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 ARHGAP40Q5TG30 622 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 PSRC1Q6PGN9 363 aaPredicted RBP12.77□□□□□ -0.36
SF1-201ENST00000227503 ZAR1Q86SH2 424 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 ARL11Q969Q4 196 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 RHOVQ96L33 236 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 KLF15Q9UIH9 416 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 DTX4Q9Y2E6 619 aa12.77□□□□□ -0.36
SF1-201ENST00000227503 CARHSP1Q9Y2V2 147 aaKnown RBP12.77□□□□□ -0.36
SF1-201ENST00000227503 FANCMQ8IYD8 2048 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 C5orf67F2Z3F1 127 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 SNAPC5O75971 98 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 OR2F2O95006 317 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 RAB3DO95716 219 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 EML2O95834 649 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 GPANK1O95872 356 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 THBS1P07996 1170 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 CENPAP49450 140 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 RPS21P63220 83 aaKnown RBP12.77□□□□□ -0.37
SF1-201ENST00000227503 MRPS10P82664 201 aaKnown RBP12.77□□□□□ -0.37
SF1-201ENST00000227503 SGCGQ13326 291 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 OR2F1Q13607 317 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 TRMT12Q53H54 448 aaKnown RBP12.77□□□□□ -0.37
SF1-201ENST00000227503 KRBOX4Q5JUW0 171 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 ZNF627Q7L945 461 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 CLEC1AQ8NC01 280 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 NT5CQ8TCD5 201 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 CMTM3Q96MX0 182 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 ATG5Q9H1Y0 275 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 TMEM74BQ9NUR3 256 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 PRR13Q9NZ81 148 aa12.77□□□□□ -0.37
SF1-201ENST00000227503 A0A1W2PQU0 124 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 C1orf196B1AJZ1 125 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 ITGB2P05107 769 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 RPS4Y1P22090 263 aaKnown RBP12.76□□□□□ -0.37
SF1-201ENST00000227503 PRSS3P35030 304 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 FHL1Q13642 323 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 PON3Q15166 354 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 OR52W1Q6IF63 320 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 OR10K2Q6IF99 312 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 FBXO42Q6P3S6 717 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 ENPP7Q6UWV6 458 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 ZNF813Q6ZN06 617 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 TMEFF1Q8IYR6 380 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 SYS1Q8N2H4 156 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 NRIP2Q9BQI9 281 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 APOOQ9BUR5 198 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 SLC17A9Q9BYT1 436 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 ZNF350Q9GZX5 532 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 FGF22Q9HCT0 170 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 FRRS1LQ9P0K9 344 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 TBC1D3EA0A087X179 549 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 TVP23AA6NH52 213 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 ITGA5P08648 1049 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 SFTA3P0C7M3 94 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 SMIM10L1P0DMW3 83 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 CALCBP10092 127 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 CD1CP29017 333 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 PRKXP51817 358 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 RPS15AP62244 130 aaKnown RBP12.76□□□□□ -0.37
SF1-201ENST00000227503 RUNX2Q13950 521 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 SGCAQ16586 387 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 EIPR1Q53HC9 387 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 OR2B11Q5JQS5 317 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 TMEM240Q5SV17 173 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 PPP1R3BQ86XI6 285 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 INO80EQ8NBZ0 244 aaPredicted RBP12.76□□□□□ -0.37
SF1-201ENST00000227503 TMEM106AQ96A25 262 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 SCARF2Q96GP6 870 aaPredicted RBP12.76□□□□□ -0.37
SF1-201ENST00000227503 SMIM10Q96HG1 83 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 PARP12Q9H0J9 701 aaKnown RBP12.76□□□□□ -0.37
SF1-201ENST00000227503 SEMA6CQ9H3T2 930 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 FLRT3Q9NZU0 649 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 TBC1D29Q9UFV1 150 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 CDV3Q9UKY7 258 aaKnown RBP12.76□□□□□ -0.37
SF1-201ENST00000227503 PCDHGA1Q9Y5H4 931 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 MYO9BQ13459 2157 aa12.76□□□□□ -0.37
SF1-201ENST00000227503 H7C1C5 153 aa12.75□□□□□ -0.37
SF1-201ENST00000227503 PMS2P2O95744 297 aa12.75□□□□□ -0.37
SF1-201ENST00000227503 CD8AP01732 235 aa12.75□□□□□ -0.37
SF1-201ENST00000227503 ZNF14P17017 642 aaPredicted RBP12.75□□□□□ -0.37
SF1-201ENST00000227503 VAMP1P23763 118 aa12.75□□□□□ -0.37
SF1-201ENST00000227503 LCN6P62502 163 aa12.75□□□□□ -0.37
SF1-201ENST00000227503 MST1LQ2TV78 715 aa12.75□□□□□ -0.37
SF1-201ENST00000227503 FHL5Q5TD97 284 aa12.75□□□□□ -0.37
SF1-201ENST00000227503 RNF113BQ8IZP6 322 aaKnown RBP12.75□□□□□ -0.37
SF1-201ENST00000227503 PLPP7Q8NBV4 271 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms