RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 NANSQ9NR45 359 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 GLTPQ9NZD2 209 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 MYEF2Q9P2K5 600 aaKnown RBP12.9□□□□□ -0.34
UPK3A-201ENST00000216211 REV1Q9UBZ9 1251 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 RIMS3Q9UJD0 308 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 DHRS12A0PJE2 317 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 TRAPPC13A5PLN9 417 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 M0R233 179 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 GMNNO75496 209 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 NCK1P16333 377 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 MAD2L1BPQ15013 274 aaPredicted RBP12.89□□□□□ -0.35
UPK3A-201ENST00000216211 ELFN2Q5R3F8 820 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 OGFRL1Q5TC84 451 aaPredicted RBP12.89□□□□□ -0.35
UPK3A-201ENST00000216211 PATL1Q86TB9 770 aaKnown RBP12.89□□□□□ -0.35
UPK3A-201ENST00000216211 ZNF584Q8IVC4 421 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 ADGRG5Q8IZF4 528 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 SLC22A24Q8N4F4 322 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 PAPD5Q8NDF8 572 aaKnown RBP12.89□□□□□ -0.35
UPK3A-201ENST00000216211 CANT1Q8WVQ1 401 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 HPS1Q92902 700 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 ZNF566Q969W8 418 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 TAMM41Q96BW9 452 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 NSMCE2Q96MF7 247 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 SH3GL3Q99963 347 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 C19orf24Q9BVV8 132 aa12.89□□□□□ -0.35
UPK3A-201ENST00000216211 GSTA4O15217 222 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 HPXP02790 462 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 HIST1H2ABP04908 130 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 COL8A2P25067 703 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 PCGF2P35227 344 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 RPS23P62266 143 aaKnown RBP12.88□□□□□ -0.35
UPK3A-201ENST00000216211 ERICH5Q6P6B1 374 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 LRFN4Q6PJG9 635 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 HIST3H2AQ7L7L0 130 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 SLC30A8Q8IWU4 369 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 LINC01356Q8N9X3 169 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 HIST1H2ACQ93077 130 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 SLC25A44Q96H78 314 aaPredicted RBP12.88□□□□□ -0.35
UPK3A-201ENST00000216211 PKP2Q99959 881 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 PRSS27Q9BQR3 290 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 MS4A5Q9H3V2 200 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 DUSP13Q9UII6 198 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 ZNF229Q9UJW7 825 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 FBXL3Q9UKT7 428 aa12.88□□□□□ -0.35
UPK3A-201ENST00000216211 CXCR6O00574 342 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 DHHO43323 396 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 SERPINA5P05154 406 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 QDPRP09417 244 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 ASAH2BP0C7U1 165 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 PGA4P0DJD7 388 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 PGA3P0DJD8 388 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 CCL2P13500 99 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 CRYBA2P53672 197 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 CDH15P55291 814 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 MYBPC1Q00872 1141 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 VMACQ2NL98 169 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 ALKBH6Q3KRA9 238 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 INTS11Q5TA45 600 aaKnown RBP12.87□□□□□ -0.35
UPK3A-201ENST00000216211 NANOGNBQ7Z5D8 188 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 CARM1Q86X55 608 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 DNAJC9Q8WXX5 260 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 MPP4Q96JB8 637 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 ZNF426Q9BUY5 554 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 NARFLQ9H6Q4 476 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 RNF121Q9H920 327 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
UPK3A-201ENST00000216211 TMEM38BQ9NVV0 291 aa12.87□□□□□ -0.35
UPK3A-201ENST00000216211 TMEFF2Q9UIK5 374 aaPredicted RBP12.87□□□□□ -0.35
UPK3A-201ENST00000216211 A0A1W2PPW3 197 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 BLOC1S5-TXNDC5H3BN57 136 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 BCL10O95999 233 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 F13BP05160 661 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 FAM157BP0CG42 384 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 OR8G3PP0DMU2 310 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 NAT2P11245 290 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 FCGR1AP12314 374 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 HOXB6P17509 224 aaKnown RBP12.86□□□□□ -0.35
UPK3A-201ENST00000216211 TNFRSF1BP20333 461 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 GPR6P46095 362 aaPredicted RBP12.86□□□□□ -0.35
UPK3A-201ENST00000216211 CLRN1P58418 232 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 RUNX1T1Q06455 604 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 LPCAT4Q643R3 524 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 PAQR4Q8N4S7 273 aaPredicted RBP12.86□□□□□ -0.35
UPK3A-201ENST00000216211 SLC30A7Q8NEW0 376 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 OR4K5Q8NGD3 323 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 PFN4Q8NHR9 129 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 LRTOMTQ8WZ04 291 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 YIPF5Q969M3 257 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 C1orf159Q96HA4 380 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 ZNF347Q96SE7 839 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 SLC19A3Q9BZV2 496 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 OR51B6Q9H340 312 aa12.86□□□□□ -0.35
UPK3A-201ENST00000216211 NCR1O76036 304 aa12.85□□□□□ -0.35
UPK3A-201ENST00000216211 FARS2O95363 451 aaKnown RBP12.85□□□□□ -0.35
UPK3A-201ENST00000216211 CLPTM1O96005 669 aa12.85□□□□□ -0.35
UPK3A-201ENST00000216211 IGHG1P01857 330 aa12.85□□□□□ -0.35
UPK3A-201ENST00000216211 ACHEP22303 614 aa12.85□□□□□ -0.35
UPK3A-201ENST00000216211 PEX2P28328 305 aa12.85□□□□□ -0.35
UPK3A-201ENST00000216211 SRP14P37108 136 aaKnown RBP12.85□□□□□ -0.35
UPK3A-201ENST00000216211 UGT2B15P54855 530 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms