RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TMEM235A6NFC5 223 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 CD1EP15812 388 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 TGM1P22735 817 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 INSL4Q14641 139 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 AGERQ15109 404 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 CDONQ4KMG0 1287 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 OR14A16Q8NHC5 309 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 PLPPR2Q96GM1 343 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 ANKRD19PQ9H560 264 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 SLC39A9Q9NUM3 307 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 RBFOX1Q9NWB1 397 aaKnown RBP12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 FCMRO60667 390 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 TGM6O95932 706 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 PKLRP30613 574 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 METAP1P53582 386 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 FAM27D1Q5T7N8 215 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 SLC30A7Q8NEW0 376 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 UTP23Q9BRU9 249 aaKnown RBP12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 SEMA6CQ9H3T2 930 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 AUNIPQ9H7T9 357 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 DECR2Q9NUI1 292 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 TMEM189-UBE2V1I3L0A0 370 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 TMPRSS11DO60235 418 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 LACC1Q8IV20 430 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 ZFP62Q8NB50 900 aaPredicted RBP12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 HAVCR2Q8TDQ0 301 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 ACER3Q9NUN7 267 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 CSAG2Q9Y5P2 127 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 TPMTP51580 245 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 KIAA0907Q7Z7F0 614 aaPredicted RBP12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 L3MBTL4Q8NA19 623 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 OR56B1Q8NGI3 324 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 C14orf79Q96F83 325 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 PCYT1BQ9Y5K3 369 aaPredicted RBP12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 LOC100289279A0A1B0GTE1 492 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 MTHFD2P13995 350 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 RAP2BP61225 183 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 SFT2D1Q8WV19 159 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 TSLPQ969D9 159 aa12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 BOKQ9UMX3 212 aaPredicted RBP12.48□□□□□ -0.41
TGFBR3-201ENST00000212355 TSTD3H0UI37 97 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 M0R082 166 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 ICOSLGO75144 302 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 SLCO2B1O94956 709 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 ARRB2P32121 409 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 MTNR1BP49286 362 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 ASCL1P50553 236 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 C4orf17Q53FE4 359 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 RBPMSQ93062 196 aaKnown RBP12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 SRPK3Q9UPE1 567 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 CD46P15529 392 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 TEKQ02763 1124 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 TIGD3Q6B0B8 471 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 PLPP5Q8NEB5 264 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 DEFB108BQ8NET1 73 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 SCGB2A1O75556 95 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 OR10J4P0C629 311 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 FAM157BP0CG42 384 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 PTHLHP12272 177 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 ALOX5APP20292 161 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 OPRM1P35372 400 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 RAB5CP51148 216 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 NANOGP1Q8N7R0 232 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 BCORP1Q8N888 145 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 UBAC2Q8NBM4 344 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 THOC3Q96J01 351 aaKnown RBP12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 ZNF346Q9UL40 294 aaKnown RBP12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 WIF1Q9Y5W5 379 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 SIRPB1O00241 398 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 IAPPP10997 89 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 DPY19L2P2Q6ZN68 376 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 ZBP1Q9H171 429 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 CTSFQ9UBX1 484 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 PLEKHB1Q9UF11 243 aaPredicted RBP12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 TNFSF11O14788 317 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 GSTP1P09211 210 aaKnown RBP12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 CDAP32320 146 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 TMEM123Q8N131 208 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 KCNRGQ8N5I3 272 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 UBALD1Q8TB05 177 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 ITPKCQ96DU7 683 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 REEP6Q96HR9 211 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 PLA2G12AQ9BZM1 189 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 P2RY12Q9H244 342 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 KCNG2Q9UJ96 466 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 CORINQ9Y5Q5 1042 aa12.47□□□□□ -0.41
TGFBR3-201ENST00000212355 SSSCA1O60232 199 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 FGF17O60258 216 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 GALR3O60755 368 aaPredicted RBP12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 CD1CP29017 333 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 HENMT1Q5T8I9 393 aaKnown RBP12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 C1orf140Q5VVS0 124 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 MUCL1Q96DR8 90 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 TEAD3Q99594 435 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 MED29Q9NX70 200 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 MED19A0JLT2 244 aaPredicted RBP12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 LINC01565O15544 149 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 ACHEP22303 614 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 SLC35A2P78381 396 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 OTUD1Q5VV17 481 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms