RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PCP4P48539 62 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 DAP3P51398 398 aaKnown RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 SLC35D2Q76EJ3 337 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 OR5AR1Q8NGP9 310 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 SPTSSAQ969W0 71 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 ANKRD9Q96BM1 317 aaPredicted RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 C1orf198Q9H425 327 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 SLC22A7Q9Y694 548 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 A0A1W2PPQ1 181 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 AADACP22760 399 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 AOAHP28039 575 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 TNFRSF4P43489 277 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 CPT1CQ8TCG5 803 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 CORO2AQ92828 525 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 KIRREL1Q96J84 757 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 CASD1Q96PB1 797 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 HAO2Q9NYQ3 351 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 KDM4EB2RXH2 506 aaPredicted RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 BET1O15155 118 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 HRO43593 1189 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 LCATP04180 440 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 DCTDP32321 178 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 SFTPDP35247 375 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 SLC6A11P48066 632 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 GLDNQ6ZMI3 551 aaPredicted RBP9.62□□□□□ -0.87
VCL-201ENST00000211998 FAM174AQ8TBP5 190 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 ASB13Q8WXK3 278 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 DTD2Q96FN9 168 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 ULBP3Q9BZM4 244 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 ZDHHC5Q9C0B5 715 aa9.62□□□□□ -0.87
VCL-201ENST00000211998 F13BP05160 661 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 DBHP09172 617 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 P2RY2P41231 377 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 VEGFBP49765 207 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 TPPP2P59282 170 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 EEF1A1P68104 462 aaKnown RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 SRPXP78539 464 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 NTHL1P78549 312 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 ZNF90Q03938 601 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 EEF1A2Q05639 463 aaKnown RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 NR0B2Q15466 257 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 EEF1A1P5Q5VTE0 462 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 BTNL8Q6UX41 500 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 PPP1R3BQ86XI6 285 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 TTC9BQ8N6N2 239 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 TMEM255BQ8WV15 326 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 TSSK2Q96PF2 358 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 NMNAT3Q96T66 252 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 LMAN1LQ9HAT1 526 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 CDH20Q9HBT6 801 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 DOK2O60496 412 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 POU3F3P20264 500 aaPredicted RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 CST5P28325 142 aaPredicted RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 BLVRBP30043 206 aaPredicted RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 ELLP55199 621 aaPredicted RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 HSF1Q00613 529 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 ENDOGQ14249 297 aaKnown RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 LINC00303Q3SY05 128 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 XKR7Q5GH72 579 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 TRNP1Q6NT89 227 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 SYT9Q86SS6 491 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 TMEM99Q8N816 258 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 TIMM29Q9BSF4 260 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 C1QTNF3Q9BXJ4 246 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 CHST8Q9H2A9 424 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 SLC2A9Q9NRM0 540 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 RAB22AQ9UL26 194 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 MRPS28Q9Y2Q9 187 aaKnown RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 BAZ2AQ9UIF9 1905 aaKnown RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 CEBPBP17676 345 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 ACKR3P25106 362 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 SOX18P35713 384 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 THBS3P49746 956 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 PJVKQ0ZLH3 352 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 PMPCAQ10713 525 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 MSMO1Q15800 293 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 SLC36A2Q495M3 483 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 GGTA1PQ4G0N0 100 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 Q6ZSR6 202 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 GALNT16Q8N428 558 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 KCNG3Q8TAE7 436 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 REEP6Q96HR9 211 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 DUSP23Q9BVJ7 150 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 TINAGL1Q9GZM7 467 aaPredicted RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 LYRM2Q9NU23 88 aaPredicted RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 SEC14L6B5MCN3 397 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 ZNF888P0CJ79 500 aaPredicted RBP9.61□□□□□ -0.87
VCL-201ENST00000211998 DPP4P27487 766 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 RNLSQ5VYX0 342 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 ACSM5Q6NUN0 579 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 SH2D5Q6ZV89 423 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 SLC24A4Q8NFF2 622 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 ARRDC2Q8TBH0 407 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 LINC00597Q9H2U6 94 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 TMEM38AQ9H6F2 299 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 GPR173Q9NS66 373 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 PCDHGA1Q9Y5H4 931 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 POMT1Q9Y6A1 747 aa9.61□□□□□ -0.87
VCL-201ENST00000211998 NAV1Q8NEY1 1877 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 ZC3H12DA2A288 527 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms