RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 VASH1Q7L8A9 365 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-232ENST00000641947 DPY19L4Q7Z388 723 aa15.65■□□□□ 0.1
PHGDH-232ENST00000641947 ZIC4Q8N9L1 334 aa15.65■□□□□ 0.1
PHGDH-232ENST00000641947 TMEM178AQ8NBL3 297 aa15.65■□□□□ 0.1
PHGDH-232ENST00000641947 OR9K2Q8NGE7 335 aa15.65■□□□□ 0.1
PHGDH-232ENST00000641947 OR6X1Q8NH79 312 aa15.65■□□□□ 0.1
PHGDH-232ENST00000641947 SNIP1Q8TAD8 396 aaKnown RBP15.65■□□□□ 0.1
PHGDH-232ENST00000641947 UFD1Q92890 307 aa15.65■□□□□ 0.1
PHGDH-232ENST00000641947 RNF166Q96A37 237 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-232ENST00000641947 SLC25A44Q96H78 314 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-232ENST00000641947 INTS14Q96SY0 518 aa15.65■□□□□ 0.1
PHGDH-232ENST00000641947 AMELYQ99218 206 aa15.65■□□□□ 0.1
PHGDH-232ENST00000641947 SMAD5Q99717 465 aaKnown RBP15.65■□□□□ 0.1
PHGDH-232ENST00000641947 TM9SF2Q99805 663 aa15.65■□□□□ 0.1
PHGDH-232ENST00000641947 PCDHGB7Q9Y5F8 929 aa15.65■□□□□ 0.1
PHGDH-232ENST00000641947 DNPH1O43598 174 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 MT-ND5P03915 603 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 GAAP10253 952 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 CELP19835 753 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 SDHBP21912 280 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 CENPAP49450 140 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 PLXDC2Q6UX71 529 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 PLEKHG7Q6ZR37 379 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.64■□□□□ 0.1
PHGDH-232ENST00000641947 DYNC2LI1Q8TCX1 351 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 ROBO4Q8WZ75 1007 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 PELI1Q96FA3 418 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 NAA11Q9BSU3 229 aaPredicted RBP15.64■□□□□ 0.1
PHGDH-232ENST00000641947 ACOXLQ9NUZ1 547 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 KCNG2Q9UJ96 466 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 STUB1Q9UNE7 303 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 MSRB2Q9Y3D2 182 aa15.64■□□□□ 0.1
PHGDH-232ENST00000641947 NCOA6Q14686 2063 aaPredicted RBP15.64■□□□□ 0.09
PHGDH-232ENST00000641947 ZNF708P17019 499 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 CRABP1P29762 137 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 BDH1Q02338 343 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 INSL4Q14641 139 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 HIST3H3Q16695 136 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 ABLIM2Q6H8Q1 611 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 LRRC69Q6ZNQ3 347 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 FAM109AQ8N4B1 249 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 SLC26A10Q8NG04 563 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 NSMAFQ92636 917 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 DEFB127Q9H1M4 99 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 ST6GALNAC2Q9UJ37 374 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 PMF1-BGLAPU3KQ54 211 aa15.64■□□□□ 0.09
PHGDH-232ENST00000641947 ZNF716A6NP11 495 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 LINC01387J3KSC0 135 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 DVL2O14641 736 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 WNT11O96014 354 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 IGHG1P01857 330 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 HLA-DQA2P01906 255 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 ALOX5APP20292 161 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 NTF4P34130 210 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 CLRN1P58418 232 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 ACTA2P62736 377 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 ACTG2P63267 376 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 FABP5Q01469 135 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 C3AR1Q16581 482 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 PHYHD1Q5SRE7 291 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 SLC22A16Q86VW1 577 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 SYS1Q8N2H4 156 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 ZHX1-C8orf76Q96EF9 292 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 DTNBP1Q96EV8 351 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 DCSTAMPQ9H295 470 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 ZDHHC11Q9H8X9 412 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 QPCTLQ9NXS2 382 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 MRM2Q9UI43 246 aaKnown RBP15.63■□□□□ 0.09
PHGDH-232ENST00000641947 GNG8Q9UK08 70 aa15.63■□□□□ 0.09
PHGDH-232ENST00000641947 ZNF670-ZNF695F2Z2N8 137 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 ZNF593O00488 134 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-232ENST00000641947 AHCYL1O43865 530 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 WISP2O76076 250 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 VAMP5O95183 116 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 PDGFAP04085 211 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 PSMA1P25786 263 aaKnown RBP15.62■□□□□ 0.09
PHGDH-232ENST00000641947 GABRA5P31644 462 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 SRYQ05066 204 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 OTOSQ8NHW6 89 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 SNX33Q8WV41 574 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 ZNF775Q96BV0 537 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-232ENST00000641947 OR2M2Q96R28 347 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 TMED9Q9BVK6 235 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 ACKR4Q9NPB9 350 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 EXOSC4Q9NPD3 245 aaKnown RBP15.62■□□□□ 0.09
PHGDH-232ENST00000641947 TRIM36Q9NQ86 728 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 FREM1Q5H8C1 2179 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 VGLL3A8MV65 326 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 NPIPA2E9PIF3 369 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 NPIPA3F8WFD2 350 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 KHDRBS3O75525 346 aaKnown RBP15.62■□□□□ 0.09
PHGDH-232ENST00000641947 ZNF432O94892 652 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 ABHD16AO95870 558 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 OR8G3PP0DMU2 310 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 PSMB10P40306 273 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 SELENOPP49908 381 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 HSF2Q03933 536 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 GLO1Q04760 184 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 LRFN4Q6PJG9 635 aa15.62■□□□□ 0.09
PHGDH-232ENST00000641947 SLC25A47Q6Q0C1 308 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms