RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TMEM106AQ96A25 262 aa15.25■□□□□ 0.03
PHGDH-229ENST00000641891 NXPE2Q96DL1 559 aa15.25■□□□□ 0.03
PHGDH-229ENST00000641891 DCBLD2Q96PD2 775 aa15.25■□□□□ 0.03
PHGDH-229ENST00000641891 NUDT15Q9NV35 164 aa15.25■□□□□ 0.03
PHGDH-229ENST00000641891 MRPL15Q9P015 296 aaKnown RBP15.25■□□□□ 0.03
PHGDH-229ENST00000641891 GTF2A1LQ9UNN4 478 aa15.25■□□□□ 0.03
PHGDH-229ENST00000641891 COA3Q9Y2R0 106 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-229ENST00000641891 TRBV5-7A0A0A0MS05 114 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 TMEM212A6NML5 194 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 H3BML4 177 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 PHYHO14832 338 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 OR2J2O76002 312 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 PNPP00491 289 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 GIFP27352 417 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 MAPK3P27361 379 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-229ENST00000641891 CCR6P51684 374 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 RRAS2P62070 204 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-229ENST00000641891 MFGE8Q08431 387 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-229ENST00000641891 PLA2G7Q13093 441 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 TMPRSS12Q86WS5 348 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 SLITRK2Q9H156 845 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 PAQR5Q9NXK6 330 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-229ENST00000641891 A0A0A6YYJ9 748 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 TRABD2BA6NFA1 517 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 PTHLHP12272 177 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 IFNGR1P15260 489 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 C19orf57Q0VDD7 668 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 EIF2B1Q14232 305 aaKnown RBP15.24■□□□□ 0.03
PHGDH-229ENST00000641891 HACD4Q5VWC8 232 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 OR7E24Q6IFN5 339 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 SLC18B1Q6NT16 456 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 LYPD8Q6UX82 237 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 SYNPRQ8TBG9 265 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 SMIM4Q8WVI0 70 aa15.24■□□□□ 0.03
PHGDH-229ENST00000641891 IGKV1D-43A0A0B4J1Z2 117 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 SMLR1H3BR10 107 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 MEN1O00255 615 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 GSTZ1O43708 216 aaPredicted RBP15.23■□□□□ 0.03
PHGDH-229ENST00000641891 EFNA2O43921 213 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 OPN1LWP04000 364 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 TDGF1P13385 188 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 ZNF28P17035 718 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 GDNFP39905 211 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 PTGDSP41222 190 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 RASGEF1BQ0VAM2 473 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 KLF9Q13886 244 aaPredicted RBP15.23■□□□□ 0.03
PHGDH-229ENST00000641891 TMEM53Q6P2H8 277 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 BAIAP2L2Q6UXY1 529 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 WDR5BQ86VZ2 330 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 GPR148Q8TDV2 347 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 ASB10Q8WXI3 467 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 DPAGT1Q9H3H5 408 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 MED29Q9NX70 200 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 PPP4R1LQ9P1A2 415 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 MYOTQ9UBF9 498 aa15.23■□□□□ 0.03
PHGDH-229ENST00000641891 CTDSPLO15194 276 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 TMIGD3P0DMS9 266 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-229ENST00000641891 APOBEC1P41238 236 aaKnown RBP15.22■□□□□ 0.03
PHGDH-229ENST00000641891 BTG1P62324 171 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 FOXK1P85037 733 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 TMEM205Q6UW68 189 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 C5orf46Q6UWT4 87 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 ZNF679Q8IYX0 411 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 DND1Q8IYX4 353 aaKnown RBP15.22■□□□□ 0.03
PHGDH-229ENST00000641891 TCTE3Q8IZS6 198 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 OR5M1Q8NGP8 315 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 RNF138Q8WVD3 245 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 TSEN15Q8WW01 171 aaKnown RBP15.22■□□□□ 0.03
PHGDH-229ENST00000641891 AKAP1Q92667 903 aaKnown RBP eCLIP15.22■□□□□ 0.03
PHGDH-229ENST00000641891 EDAQ92838 391 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 CMTM3Q96MX0 182 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 NKX3-1Q99801 234 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-229ENST00000641891 ABHD6Q9BV23 337 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 FOXJ3Q9UPW0 622 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 FRYLO94915 3013 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 CCDC163A0A0D9SF12 145 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 ANXA2P2A6NMY6 339 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 NPIPA5E9PKD4 350 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 DOK2O60496 412 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 ZFAND5O76080 213 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 TCRBP04435 133 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 ANXA2P07355 339 aaKnown RBP15.22■□□□□ 0.03
PHGDH-229ENST00000641891 HOXA6P31267 233 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 CCKBRP32239 447 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 SUMO3P55854 103 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-229ENST00000641891 POU3F1Q03052 451 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-229ENST00000641891 CDK10Q15131 360 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 BCL2A1Q16548 175 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 H1FNTQ75WM6 255 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-229ENST00000641891 KRT77Q7Z794 578 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 OR5L2Q8NGL0 311 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 OR52I2Q8NH67 350 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 MFSD8Q8NHS3 518 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 RNF128Q8TEB7 428 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 ASB17Q8WXJ9 295 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 NPIPA1Q9UND3 350 aa15.22■□□□□ 0.03
PHGDH-229ENST00000641891 WDR87Q6ZQQ6 2873 aa15.21■□□□□ 0.03
PHGDH-229ENST00000641891 A6NL46 340 aa15.21■□□□□ 0.03
PHGDH-229ENST00000641891 GPR171O14626 319 aa15.21■□□□□ 0.03
PHGDH-229ENST00000641891 ZNF432O94892 652 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms