RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 OPN3Q9H1Y3 402 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 SRA1Q9HD15 236 aaKnown RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 KCNJ16Q9NPI9 418 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 TAS2R16Q9NYV7 291 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 VSX1Q9NZR4 365 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 NDRG4Q9ULP0 352 aaKnown RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 MOKQ9UQ07 419 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 RNF6Q9Y252 685 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 FKBP7Q9Y680 259 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 PCNX3Q9H6A9 2034 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 IRGMA1A4Y4 181 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 FAM183AA6NL82 134 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 PRODHO43272 600 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 DHHO43323 396 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 PRKYO43930 277 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 UPK3AO75631 287 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 TNFSF13O75888 250 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 SLC2A10O95528 541 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 MPGP29372 298 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 FMO3P31513 532 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 CDKN2AP42771 156 aaKnown RBP11.45□□□□□ -0.58
PHGDH-218ENST00000641491 ASCL1P50553 236 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 SLC25A1P53007 311 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 POU4F2Q12837 409 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 MED21Q13503 144 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 P2RY6Q15077 328 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 SGCAQ16586 387 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 CEACAM16Q2WEN9 425 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 SLC35D3Q5M8T2 416 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 TSPO2Q5TGU0 170 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 C9orf135Q5VTT2 229 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 ZNF691Q5VV52 312 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 Q6ZT83 130 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 SEM1Q6ZVN7 128 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 BTLAQ7Z6A9 289 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 GLB1L2Q8IW92 636 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 TMEM123Q8N131 208 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 MARVELD2Q8N4S9 558 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 TFAP2CQ92754 450 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 TMEM54Q969K7 222 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 STARD4Q96DR4 205 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 MRPL48Q96GC5 212 aaKnown RBP11.45□□□□□ -0.58
PHGDH-218ENST00000641491 NUAK2Q9H093 628 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 RACGAP1Q9H0H5 632 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 GPR35Q9HC97 309 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 PLSCR4Q9NRQ2 329 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 SCN3BQ9NY72 215 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 ELOVL5Q9NYP7 299 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 MALT1Q9UDY8 824 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 PRSS50Q9UI38 385 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 BLOC1S6Q9UL45 172 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 DNAJC13O75165 2243 aa11.45□□□□□ -0.58
PHGDH-218ENST00000641491 FREM3P0C091 2139 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 ZNF99A8MXY4 864 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-218ENST00000641491 M0R129 80 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 TOXO94900 526 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 SPI1P17947 270 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 EPHA2P29317 976 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 SNRPGP62308 76 aaKnown RBP11.44□□□□□ -0.58
PHGDH-218ENST00000641491 RUNX1T1Q06455 604 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 FMODQ06828 376 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 APOFQ13790 326 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 STK11Q15831 433 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 NXNL2Q5VZ03 156 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 OR7E24Q6IFN5 339 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 XKRXQ6PP77 449 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 ZNF813Q6ZN06 617 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 NCCRP1Q6ZVX7 275 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-218ENST00000641491 ZNF808Q8N4W9 903 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-218ENST00000641491 FAM26EQ8N5C1 309 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 NAXEQ8NCW5 288 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 NPEPL1Q8NDH3 523 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 OR2AJ1Q8NGZ0 328 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 MUS81Q96NY9 551 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 FOXB1Q99853 325 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 HDHD5Q9BXW7 423 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 ANKRD60Q9BZ19 345 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 RNF121Q9H920 327 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 CCNB1IP1Q9NPC3 277 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 SLC7A10Q9NS82 523 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 DNAJC27Q9NZQ0 273 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 FOXD3Q9UJU5 478 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-218ENST00000641491 ING1Q9UK53 422 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-218ENST00000641491 RPL36Q9Y3U8 105 aaKnown RBP11.44□□□□□ -0.58
PHGDH-218ENST00000641491 SVILO95425 2214 aa11.44□□□□□ -0.58
PHGDH-218ENST00000641491 MED12Q93074 2177 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 SH3D21A4FU49 640 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 OR6C68A6NDL8 312 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 FAM20BO75063 409 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 ZNF432O94892 652 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 GLCEO94923 617 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 CLIC3O95833 236 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 WNT11O96014 354 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 GYPBP06028 91 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 MSR1P21757 451 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 LAP3P28838 519 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 GSTT1P30711 240 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 PCBD1P61457 104 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 ADAM8P78325 824 aa11.43□□□□□ -0.58
PHGDH-218ENST00000641491 ADARB1P78563 741 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms