RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-233	ENST00000640039	IL20RA	Q9UHF4	553 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	IGHV1-18	A0A0C4DH31	117 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	TEX13C	A0A0J9YWL9	993 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	TCRBV3S1	A0A5B6	114 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	EBAG9	O00559	213 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	CIB2	O75838	187 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	SLC2A10	O95528	541 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	RAB36	O95755	333 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	IGKV3-15	P01624	115 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	CRYAA	P02489	173 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	ZNF26	P17031	533 aa	Predicted RBP	13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	GSS	P48637	474 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	ERF	P50548	548 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	IDH3G	P51553	393 aa	Predicted RBP	13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	ZNF133	P52736	654 aa	Predicted RBP	13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	ART1	P52961	327 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	CBX1	P83916	185 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	FMOD	Q06828	376 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	PIGF	Q07326	219 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	PPP1R8	Q12972	351 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	KRR1	Q13601	381 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	NRN1L	Q496H8	165 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	C1orf146	Q5VVC0	180 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	RPL13AP3	Q6NVV1	102 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	THSD4	Q6ZMP0	1018 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	FAM122B	Q7Z309	247 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	MDP1	Q86V88	176 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	AQP11	Q8NBQ7	271 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	OR52L1	Q8NGH7	329 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	TMEM171	Q8WVE6	324 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	NEUROG1	Q92886	237 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	MBD6	Q96DN6	1003 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	KCNN2	Q9H2S1	579 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	HEATR1	Q9H583	2144 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	NRIP3	Q9NQ35	241 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	FAIM	Q9NVQ4	179 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	CISD1	Q9NZ45	108 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	CRNN	Q9UBG3	495 aa	Predicted RBP	13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	IER3IP1	Q9Y5U9	82 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039	DSCAM	O60469	2012 aa		13.8	□□□□□ -0.2
SPIN3-233	ENST00000640039		H7C1C5	153 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	AHCYL1	O43865	530 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	MGRN1	O60291	552 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	FKBP6	O75344	327 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	E2F6	O75461	281 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	IGLV1-44	P01699	117 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	CECR9	P0C854	216 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	NPR2	P20594	1047 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	NOS3	P29474	1203 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	PTDSS1	P48651	473 aa	Known RBP	13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	FXYD6P3	P58550	94 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	LCN6	P62502	163 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	MICA	Q29983	383 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	DEFB113	Q30KQ7	82 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	RFX4	Q33E94	735 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	SLC25A47	Q6Q0C1	308 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	ZNF620	Q6ZNG0	422 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	SLC16A14	Q7RTX9	510 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	DPPA2	Q7Z7J5	298 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	ADCK1	Q86TW2	530 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	CLDN22	Q8N7P3	220 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	RASD2	Q96D21	266 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	ERMAP	Q96PL5	475 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	IFT27	Q9BW83	186 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	CXorf56	Q9H5V9	222 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	RNF121	Q9H920	327 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	BEX4	Q9NWD9	120 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	VNN3	Q9NY84	501 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	FBXL3	Q9UKT7	428 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	MOK	Q9UQ07	419 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	ATP23	Q9Y6H3	246 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	CAD	P27708	2225 aa		13.79	□□□□□ -0.2
SPIN3-233	ENST00000640039	PRSS37	A4D1T9	235 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	ZNF503-AS2	A6NEH8	195 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	ATP6V1G2-DDX39B	F2Z307	99 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	SOCS2	O14508	198 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	SMPD2	O60906	423 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	PPP1R3D	O95685	299 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	APEH	P13798	732 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	GSTM3	P21266	225 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	GIPR	P48546	466 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	RAB1A	P62820	205 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	MRPS34	P82930	218 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	NAAA	Q02083	359 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	SLC36A2	Q495M3	483 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	MEST	Q5EB52	335 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	TMEM53	Q6P2H8	277 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	JAZF1	Q86VZ6	243 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	SKA3	Q8IX90	412 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	IL17RD	Q8NFM7	739 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	OR10G2	Q8NGC3	310 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	GIPC3	Q8TF64	312 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	SMAP2	Q8WU79	429 aa	Predicted RBP	13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	NMD3	Q96D46	503 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	SAMD8	Q96LT4	415 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	FOXC2	Q99958	501 aa		13.78	□□□□□ -0.2
SPIN3-233	ENST00000640039	SH3GL3	Q99963	347 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms