RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	RAP2B	P61225	183 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	ILK	Q13418	452 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	RBMS2	Q15434	407 aa	Known RBP	12.78	□□□□□ -0.36
MED17-222	ENST00000640027	DUSP6	Q16828	381 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	HENMT1	Q5T8I9	393 aa	Known RBP	12.78	□□□□□ -0.36
MED17-222	ENST00000640027	NXNL2	Q5VZ03	156 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	B3GNT8	Q7Z7M8	397 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	RPL3L	Q92901	407 aa	Known RBP	12.78	□□□□□ -0.36
MED17-222	ENST00000640027	CPNE4	Q96A23	557 aa	Predicted RBP	12.78	□□□□□ -0.36
MED17-222	ENST00000640027	SCN9A	Q15858	1988 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	GABARAP	H6UMI1	98 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	GABARAP	O95166	117 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	MAP2K6	P52564	334 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	RAB11A	P62491	216 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	GLYATL3	Q5SZD4	288 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	DCXR	Q7Z4W1	244 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	CPEB3	Q8NE35	698 aa	Known RBP	12.78	□□□□□ -0.36
MED17-222	ENST00000640027	TMEM255B	Q8WV15	326 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	C8orf44	Q96CB5	159 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	UBQLN3	Q9H347	655 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	TMEM9B	Q9NQ34	198 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	DUSP22	Q9NRW4	184 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	TXNL4B	Q9NX01	149 aa	Known RBP	12.78	□□□□□ -0.36
MED17-222	ENST00000640027	PRRT4	C9JH25	899 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	PLPP1	O14494	284 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	ZNF728	P0DKX0	622 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	SHC1	P29353	583 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	GABRA5	P31644	462 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	TATDN3	Q17R31	274 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	TRMT12	Q53H54	448 aa	Known RBP	12.78	□□□□□ -0.36
MED17-222	ENST00000640027	NOXA1	Q86UR1	476 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	PLPP5	Q8NEB5	264 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	TCTEX1D2	Q8WW35	142 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	TCEAL2	Q9H3H9	227 aa	Predicted RBP	12.78	□□□□□ -0.36
MED17-222	ENST00000640027	NRIP3	Q9NQ35	241 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	CHRNA9	Q9UGM1	479 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	HRH3	Q9Y5N1	445 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027		H7C1Q1	480 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027		K7ESM1	405 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	NSA2	O95478	260 aa	Known RBP	12.78	□□□□□ -0.36
MED17-222	ENST00000640027	MT-ATP6	P00846	226 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	ALPL	P05186	524 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	GUSB	P08236	651 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	SRPX	P78539	464 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	OVCH1	Q7RTY7	1134 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	LILRA2	Q8N149	483 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	CMTM2	Q8TAZ6	248 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	MFRP	Q9BY79	579 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	AMBRA1	Q9C0C7	1298 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
MED17-222	ENST00000640027	SLC39A9	Q9NUM3	307 aa		12.78	□□□□□ -0.36
MED17-222	ENST00000640027	IGHV3-64D	A0A0J9YX35	117 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027		M0R082	166 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027	OLFM2	O95897	454 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027	SNRNP70	P08621	437 aa	Known RBP	12.77	□□□□□ -0.36
MED17-222	ENST00000640027	CD22	P20273	847 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027	FKBP2	P26885	142 aa	Known RBP	12.77	□□□□□ -0.36
MED17-222	ENST00000640027	BATF	Q16520	125 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027	PYCR3	Q53H96	274 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027	TMEM81	Q6P7N7	255 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027	GDF7	Q7Z4P5	450 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027	LGALS14	Q8TCE9	139 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027	CSF3R	Q99062	836 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027	TMEM43	Q9BTV4	400 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027	NDRG3	Q9UGV2	375 aa		12.77	□□□□□ -0.36
MED17-222	ENST00000640027		F6UZH7	168 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	NUPL2	O15504	423 aa	Known RBP	12.77	□□□□□ -0.37
MED17-222	ENST00000640027	ST6GAL1	P15907	406 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	LIM2	P55344	173 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	SMAD4	Q13485	552 aa	Known RBP	12.77	□□□□□ -0.37
MED17-222	ENST00000640027	DUSP5	Q16690	384 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
MED17-222	ENST00000640027	COX20	Q5RI15	118 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	ANKRD33	Q7Z3H0	272 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	OR5AS1	Q8N127	324 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	CNTNAP3	Q9BZ76	1288 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	PGAP2	Q9UHJ9	254 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	NBAS	A2RRP1	2371 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	LRIT2	A6NDA9	550 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	ZNF701	M0R085	212 aa	Predicted RBP	12.77	□□□□□ -0.37
MED17-222	ENST00000640027	ARHGAP33	O14559	1287 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	RPS2	P15880	293 aa	Known RBP	12.77	□□□□□ -0.37
MED17-222	ENST00000640027	EMP3	P54852	163 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	SORD	Q00796	357 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	SPEM1	Q8N4L4	309 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	ABHD4	Q8TB40	342 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	EMG1	Q92979	244 aa	Known RBP	12.77	□□□□□ -0.37
MED17-222	ENST00000640027	RASD2	Q96D21	266 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	ZNF582	Q96NG8	517 aa	Predicted RBP	12.77	□□□□□ -0.37
MED17-222	ENST00000640027	EDEM2	Q9BV94	578 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	LYRM4	Q9HD34	91 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	C1orf123	Q9NWV4	160 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	GPR55	Q9Y2T6	319 aa	Predicted RBP	12.77	□□□□□ -0.37
MED17-222	ENST00000640027	ATP23	Q9Y6H3	246 aa		12.77	□□□□□ -0.37
MED17-222	ENST00000640027	IGLV3-10	A0A075B6K4	115 aa		12.76	□□□□□ -0.37
MED17-222	ENST00000640027	C4orf47	A7E2U8	309 aa		12.76	□□□□□ -0.37
MED17-222	ENST00000640027	EVI2B	P34910	448 aa		12.76	□□□□□ -0.37
MED17-222	ENST00000640027	GDNF	P39905	211 aa		12.76	□□□□□ -0.37
MED17-222	ENST00000640027	RAB13	P51153	203 aa		12.76	□□□□□ -0.37
MED17-222	ENST00000640027	PFN3	P60673	137 aa		12.76	□□□□□ -0.37

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