RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MAGEB1P43366 347 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 AGFG1P52594 562 aaKnown RBP13.57□□□□□ -0.24
TRIM3-215ENST00000639856 C17orf67Q0P5P2 114 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 CDCP2Q5VXM1 449 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 DHRS13Q6UX07 377 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 BAIAP2L2Q6UXY1 529 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 OR11G2Q8NGC1 345 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 OTOSQ8NHW6 89 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 THEM6Q8WUY1 208 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 ADAMTS14Q8WXS8 1223 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 OR11A1Q9GZK7 315 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF700Q9H0M5 742 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 SLC25A18Q9H1K4 315 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 RANGRFQ9HD47 186 aaPredicted RBP13.57□□□□□ -0.24
TRIM3-215ENST00000639856 MED11Q9P086 117 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 CAMK2AQ9UQM7 478 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 RBMX2Q9Y388 322 aaKnown RBP13.57□□□□□ -0.24
TRIM3-215ENST00000639856 PCDHGA9Q9Y5G4 932 aaKnown RBP13.57□□□□□ -0.24
TRIM3-215ENST00000639856 CACNG2Q9Y698 323 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 A0A087WV48 116 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 HSPB2A8KAH6 182 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 C9orf172C9J069 976 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 OR6A2O95222 327 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 MAPK3P27361 379 aaPredicted RBP13.57□□□□□ -0.24
TRIM3-215ENST00000639856 HSPB2Q16082 182 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 SLC36A2Q495M3 483 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 PLA1AQ53H76 456 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 UBE2NLQ5JXB2 153 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 KRT74Q7RTS7 529 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 CAPSLQ8WWF8 208 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 YIPF5Q969M3 257 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 DMRTB1Q96MA1 342 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 TAAR9Q96RI9 348 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 KLRF1Q9NZS2 232 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 FOXJ2Q9P0K8 574 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 PADI1Q9ULC6 663 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 B9D1Q9UPM9 204 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 V9GY05 133 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 ANKUB1A6NFN9 424 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 INMT-MINDY4F8WBC2 141 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 PLPP3O14495 311 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 DKK1O94907 266 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 IGHMP01871 453 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 FBXO45P0C2W1 286 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 NAGAP17050 411 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 PTGDSP41222 190 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 IFITM2Q01629 132 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 HES5Q5TA89 166 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 ARSKQ6UWY0 536 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 C6orf15Q6UXA7 325 aaPredicted RBP13.56□□□□□ -0.24
TRIM3-215ENST00000639856 ESPNLQ6ZVH7 1005 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF433Q8N7K0 673 aaPredicted RBP13.56□□□□□ -0.24
TRIM3-215ENST00000639856 OR2G2Q8NGZ5 317 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 SLC22A8Q8TCC7 542 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 CT55Q8WUE5 264 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 RNF138Q8WVD3 245 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 ST8SIA1Q92185 356 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 NSMAFQ92636 917 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 ZFP3Q96NJ6 502 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 FYTTD1Q96QD9 318 aaKnown RBP13.56□□□□□ -0.24
TRIM3-215ENST00000639856 MRPL39Q9NYK5 338 aaKnown RBP13.56□□□□□ -0.24
TRIM3-215ENST00000639856 VSX1Q9NZR4 365 aaPredicted RBP13.56□□□□□ -0.24
TRIM3-215ENST00000639856 KCNG2Q9UJ96 466 aa13.56□□□□□ -0.24
TRIM3-215ENST00000639856 MRPS7Q9Y2R9 242 aaKnown RBP13.56□□□□□ -0.24
TRIM3-215ENST00000639856 TRBV5-5A0A0J9YX44 114 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 OR4C45A6NMZ5 311 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 TCN2P20062 427 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 CENPAP49450 140 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 SRP9P49458 86 aaKnown RBP13.55□□□□□ -0.24
TRIM3-215ENST00000639856 INPP5JQ15735 1006 aaPredicted RBP13.55□□□□□ -0.24
TRIM3-215ENST00000639856 STAC2Q6ZMT1 411 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 UTS2BQ765I0 119 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF417Q8TAU3 575 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 TTC9Q92623 222 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 SPACA9Q96E40 222 aaPredicted RBP13.55□□□□□ -0.24
TRIM3-215ENST00000639856 LIN37Q96GY3 246 aaPredicted RBP13.55□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF587Q96SQ5 575 aaPredicted RBP13.55□□□□□ -0.24
TRIM3-215ENST00000639856 COMMD4Q9H0A8 199 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 SLITRK2Q9H156 845 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 TP63Q9H3D4 680 aaPredicted RBP13.55□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF160Q9HCG1 818 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 TCF7L1Q9HCS4 588 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 PARD6AQ9NPB6 346 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 A0A1B0GTH9 108 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 TMEM212A6NML5 194 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 FTCDNL1E5RQL4 147 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 CTDSPLO15194 276 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF432O94892 652 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 MT-CO3P00414 261 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 HLA-DQA2P01906 255 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 CD3GP09693 182 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 ARSBP15848 533 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 BTCP35070 178 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 BLVRAP53004 296 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 SUMO3P55854 103 aaPredicted RBP13.55□□□□□ -0.24
TRIM3-215ENST00000639856 BTG1P62324 171 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 DGCR2P98153 550 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 CD83Q01151 205 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 NTRK2Q16620 822 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 CMTM4Q8IZR5 234 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms