RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SRPX2O60687 465 aaPredicted RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF432O94892 652 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 ITGB2P05107 769 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 GUSBP08236 651 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 OR4E1P0C645 316 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 KIR2DL1P43626 348 aaPredicted RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 PSMD4P55036 377 aaKnown RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 BTG2P78543 158 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 EGR4Q05215 589 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 EIF2B5Q13144 721 aaKnown RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 TMEM196Q5HYL7 178 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 CBLN3Q6UW01 205 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 ATG4DQ86TL0 474 aaPredicted RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 YAF2Q8IY57 180 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 C12orf45Q8N5I9 185 aaPredicted RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 PLPP7Q8NBV4 271 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 DCBLD2Q96PD2 775 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 MRTO4Q9UKD2 239 aaKnown RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 FBXO4Q9UKT5 387 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 GTF2A1LQ9UNN4 478 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 SLC22A13Q9Y226 551 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 TMEM82A0PJX8 343 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 FAM74A7A6NL05 159 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 H3BUI4 141 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 K7EQS6 105 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 ASAH2BP0C7U1 165 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 APEHP13798 732 aaKnown RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 COL9A1P20849 921 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 DEFA5Q01523 94 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 RAB11BQ15907 218 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 FAM74A3Q4VXF1 159 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 ELP2Q6IA86 826 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 ASPHD2Q6ICH7 369 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 SLC35D2Q76EJ3 337 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 GALNT16Q8N428 558 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 STEAP2Q8NFT2 490 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 GPX8Q8TED1 209 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 SLC25A28Q96A46 364 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 FAM131CQ96AQ9 280 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 PELOQ9BRX2 385 aaKnown RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 TINAGL1Q9GZM7 467 aaPredicted RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 SLC25A32Q9H2D1 315 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 C1orf198Q9H425 327 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 OBP2AQ9NY56 170 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 LOC100289279A0A1B0GTE1 492 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 SLC17A2O00624 439 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 ALOX12BO75342 701 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 RAB3DO95716 219 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 UBBP0CG47 229 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 UBCP0CG48 685 aaKnown RBP9.87□□□□□ -0.83
SNIP1-204ENST00000638725 RPS27AP62979 156 aaKnown RBP9.87□□□□□ -0.83
SNIP1-204ENST00000638725 UBA52P62987 128 aaKnown RBP9.87□□□□□ -0.83
SNIP1-204ENST00000638725 TMEM31Q5JXX7 168 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 WBP2NLQ6ICG8 309 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 PM20D2Q8IYS1 436 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 BEST3Q8N1M1 668 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 OR1J2Q8NGS2 313 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 PHOSPHO1Q8TCT1 267 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 KTI12Q96EK9 354 aaPredicted RBP9.87□□□□□ -0.83
SNIP1-204ENST00000638725 LRRC46Q96FV0 321 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 INTS14Q96SY0 518 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 RASL12Q9NYN1 266 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 GDE1Q9NZC3 331 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 GMFGO60234 142 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 EIF4E2O60573 245 aaKnown RBP9.87□□□□□ -0.83
SNIP1-204ENST00000638725 PMS2P2O95744 297 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 WDPCPO95876 746 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 TXNDC12O95881 172 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 LIPCP11150 499 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 MGMTP16455 207 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 PRKACAP17612 351 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 GDI1P31150 447 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 GPR3P46089 330 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 LUMP51884 338 aaPredicted RBP9.87□□□□□ -0.83
SNIP1-204ENST00000638725 EGR3Q06889 387 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 RASGEF1BQ0VAM2 473 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 NR0B2Q15466 257 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 ALG11Q2TAA5 492 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 LRRC37A5PQ49AS3 106 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 BEX5Q5H9J7 111 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 MANEAQ5SRI9 462 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 TMEM205Q6UW68 189 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF627Q7L945 461 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 SEH1LQ96EE3 360 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 PTDSS2Q9BVG9 487 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 ALX4Q9H161 411 aaPredicted RBP9.87□□□□□ -0.83
SNIP1-204ENST00000638725 TMEM185BQ9H7F4 350 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 ELOVL3Q9HB03 270 aa9.87□□□□□ -0.83
SNIP1-204ENST00000638725 BARX1Q9HBU1 254 aaPredicted RBP9.87□□□□□ -0.83
SNIP1-204ENST00000638725 YBX2Q9Y2T7 364 aaKnown RBP9.87□□□□□ -0.83
SNIP1-204ENST00000638725 CCSO14618 274 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 APBB3O95704 486 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 RENP00797 406 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 AMY2AP04746 511 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ST6GAL1P15907 406 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 MAOAP21397 527 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 TAS2R19P59542 299 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ACTBP60709 375 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ACTG1P63261 375 aa9.86□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF169Q14929 603 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms