RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 OR51A4Q8NGJ6 313 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 FAM174AQ8TBP5 190 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 FAM103A1Q9BTL3 118 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 TMEM238LA0A1B0GVL6 79 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 ANTXRLA6NF34 631 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 C5orf52A6NGY3 159 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 A6NJY4 79 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 RPS23P62266 143 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 OR2T2Q6IF00 324 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 OR14A16Q8NHC5 309 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 SLC39A13Q96H72 371 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 C1orf167Q5SNV9 1468 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 ARPC3O15145 178 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 SLC35E2BP0CK96 405 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 OCEL1Q9H607 264 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 ZNF443Q9Y2A4 671 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 MED1Q15648 1581 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 LRRK1Q38SD2 2015 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 HSPB6O14558 160 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 LIPCP11150 499 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 PTAFRP25105 342 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 CAPNS2Q96L46 248 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 IL25Q9H293 177 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 CXXC1Q9P0U4 656 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 PGGHGQ32M88 737 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 B3GNT9Q6UX72 402 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 CYB561A3Q8NBI2 242 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 SFXN1Q9H9B4 322 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 A0A1B0GTW7 788 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 KCNJ3P48549 501 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 SFXN4Q6P4A7 337 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 OR10G3Q8NGC4 313 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 AQP7O14520 342 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 CA12O43570 354 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 TMEM127O75204 238 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 SLC6A11P48066 632 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 C10orf71Q711Q0 1435 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 IL1R2P27930 398 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 PM20D1Q6GTS8 502 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 IFT22Q9H7X7 185 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 HEMK1Q9Y5R4 338 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 K7ERU9 68 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 PIRO00625 290 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 FABP7O15540 132 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 SSSCA1O60232 199 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 OR13F1Q8NGS4 319 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 NAT6Q93015 286 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 RTP3Q9BQQ7 232 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 OR2J1Q9GZK6 312 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 PIGLQ9Y2B2 252 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 TCRBV21S2A2A0A5A6 115 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 TMEM88BA6NKF7 163 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 ZNF888P0CJ79 500 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 G6PCP35575 357 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 FXNQ16595 210 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 DNAJA3Q96EY1 480 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 F2RL3Q96RI0 385 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 NUP188Q5SRE5 1749 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 MON2Q7Z3U7 1717 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 SIX6O95475 246 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 SDHBP21912 280 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 CNN1P51911 297 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 A0A0J9YY10 115 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 M0R2Z0 102 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 OR3A1P47881 315 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 ZNF547Q8IVP9 402 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 C20orf24Q9BUV8 137 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 FZD1Q9UP38 647 aa17.93■□□□□ 0.46
CACNA1A-257ENST00000638009 MPGP29372 298 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 TMEM135Q86UB9 458 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 LGALS14Q8TCE9 139 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 POLDIP2Q9Y2S7 368 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 CSF2RAP15509 400 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 SPINT3P49223 89 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 OR2B8PP59922 312 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 SYPL2Q5VXT5 272 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 PISDQ9UG56 409 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 CSF3P09919 207 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 KHDC1LQ5JSQ8 128 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 LSRQ86X29 649 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 CLEC4CQ8WTT0 213 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 EXT1Q16394 746 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 PIP5KL1Q5T9C9 394 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 LYSMD4Q5XG99 296 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 TMEM106AQ96A25 262 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 INSL5Q9Y5Q6 135 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 ACVRL1P37023 503 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 SQSTM1Q13501 440 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 CORINQ9Y5Q5 1042 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 KDM4EB2RXH2 506 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 TBX18O95935 607 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 F2P00734 622 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 ANKRD34CP0C6C1 535 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 ELLP55199 621 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 LRRC18Q8N456 261 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 GJC3Q8NFK1 279 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 OR6M1Q8NGM8 313 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 GPX8Q8TED1 209 aa17.92■□□□□ 0.46
CACNA1A-257ENST00000638009 TOX3O15405 576 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-257ENST00000638009 FBXO45P0C2W1 286 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms