RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 DGCR6Q14129 220 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 LARS2Q15031 903 aaKnown RBP6.83□□□□□ -1.32
PNKP-229ENST00000637897 SWI5Q1ZZU3 235 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 CNPY1Q3B7I2 92 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 MS4A18Q3C1V0 323 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 ZBED5Q49AG3 693 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 ZNF311Q5JNZ3 666 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 DHRS4L2Q6PKH6 230 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 LINC00114Q6XXX2 140 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 DEF8Q6ZN54 512 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 TUBA1AQ71U36 451 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 GPR141Q7Z602 305 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 RBM45Q8IUH3 476 aaKnown RBP6.83□□□□□ -1.32
PNKP-229ENST00000637897 ZNF440Q8IYI8 595 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 DEPDC4Q8N2C3 294 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 UBE2J2Q8N2K1 259 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 LSMEM1Q8N8F7 131 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 OR10H5Q8NGA6 315 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 OR1K1Q8NGR3 316 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 OR52J3Q8NH60 311 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 MFSD8Q8NHS3 518 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 STK35Q8TDR2 534 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 SLC41A3Q96GZ6 507 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 ZNF75AQ96N20 296 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 ALKBH3Q96Q83 286 aaPredicted RBP6.83□□□□□ -1.32
PNKP-229ENST00000637897 USB1Q9BQ65 265 aaKnown RBP6.83□□□□□ -1.32
PNKP-229ENST00000637897 SF3B5Q9BWJ5 86 aaKnown RBP6.83□□□□□ -1.32
PNKP-229ENST00000637897 REG4Q9BYZ8 158 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 YIPF3Q9GZM5 350 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 EVA1AQ9H8M9 152 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 NMNAT1Q9HAN9 279 aaPredicted RBP6.83□□□□□ -1.32
PNKP-229ENST00000637897 NOX3Q9HBY0 568 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 CCNB1IP1Q9NPC3 277 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 SCN3BQ9NY72 215 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 EMC3Q9P0I2 261 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 CRNNQ9UBG3 495 aaPredicted RBP6.83□□□□□ -1.32
PNKP-229ENST00000637897 MGAT4BQ9UQ53 548 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 TPRKBQ9Y3C4 175 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 COMMD3-BMI1R4GMX3 469 aa6.83□□□□□ -1.32
PNKP-229ENST00000637897 A0A0B4J2E0 115 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 A0A1B0GX12 115 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 CIB4A0PJX0 185 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 CCDC160A6NGH7 325 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 VGLL3A8MV65 326 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 ATP6V1G2-DDX39BF2Z307 99 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 M0R082 166 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 ZNF701M0R085 212 aaPredicted RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 SLC1A7O00341 560 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 FFAR1O14842 300 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 MPZL2O60487 215 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 IGLV1-44P01699 117 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 BGLAPP02818 100 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 CBLP22681 906 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 CXCR1P25024 350 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 GGT2P36268 569 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 POLR2IP36954 125 aaKnown RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 MAP2K6P52564 334 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 UGT2B15P54855 530 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 HGFACQ04756 655 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 TBRG1Q3YBR2 411 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 FGD3Q5JSP0 725 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 ZNF770Q6IQ21 691 aaPredicted RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 AAED1Q7RTV5 226 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 GPAT4Q86UL3 456 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 TMEM123Q8N131 208 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 AQP11Q8NBQ7 271 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 C1orf162Q8NEQ5 155 aaPredicted RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 VANGL1Q8TAA9 524 aaPredicted RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 ZNF417Q8TAU3 575 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 SLC35B4Q969S0 331 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 GTPBP3Q969Y2 492 aaKnown RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 ZHX1-C8orf76Q96EF9 292 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 TXNDC15Q96J42 360 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 PRRC1Q96M27 445 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 MOGAT1Q96PD6 335 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 ZNF587Q96SQ5 575 aaPredicted RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 ARHGDIGQ99819 225 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 DHRS9Q9BPW9 319 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 NAA11Q9BSU3 229 aaPredicted RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 FNDC11Q9BVV2 318 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 CACNG6Q9BXT2 260 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 POLR2J2Q9GZM3 115 aaKnown RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 RBM38Q9H0Z9 239 aaKnown RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 POLR2J3Q9H1A7 115 aaKnown RBP6.82□□□□□ -1.32
PNKP-229ENST00000637897 ANKRD19PQ9H560 264 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 ARMC7Q9H6L4 198 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 FANCFQ9NPI8 374 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 ZNF224Q9NZL3 707 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 SNX5Q9Y5X3 404 aa6.82□□□□□ -1.32
PNKP-229ENST00000637897 A0A087WUJ7 227 aa6.81□□□□□ -1.32
PNKP-229ENST00000637897 A0A096LPE4 126 aa6.81□□□□□ -1.32
PNKP-229ENST00000637897 TRBV4-1A0A0J9YWV2 114 aa6.81□□□□□ -1.32
PNKP-229ENST00000637897 A0A1W2PPZ6 126 aa6.81□□□□□ -1.32
PNKP-229ENST00000637897 TMEM129A0AVI4 362 aa6.81□□□□□ -1.32
PNKP-229ENST00000637897 SH3PXD2BA1X283 911 aa6.81□□□□□ -1.32
PNKP-229ENST00000637897 RPL36A-HNRNPH2H7BZ11 118 aa6.81□□□□□ -1.32
PNKP-229ENST00000637897 M0R3H8 397 aa6.81□□□□□ -1.32
PNKP-229ENST00000637897 PTAFRP25105 342 aa6.81□□□□□ -1.32
PNKP-229ENST00000637897 GRPRP30550 384 aa6.81□□□□□ -1.32
PNKP-229ENST00000637897 GSTT1P30711 240 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms