RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ENTPD6O75354 484 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 FEN1P39748 380 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 TMED10P49755 219 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 KHKP50053 298 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 EFNB1P98172 346 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 EXOSC7Q15024 291 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 EBPQ15125 230 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SYPL1Q16563 259 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 PRAMEF8Q5VWM4 474 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 PRAMEF7Q5VXH5 474 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 PTCHD4Q6ZW05 846 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CADM3Q8N126 398 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 LSMEM1Q8N8F7 131 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 OR8K3Q8NH51 312 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 BBS10Q8TAM1 723 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 NUBPLQ8TB37 319 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SLC7A13Q8TCU3 470 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SFXN2Q96NB2 322 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF607Q96SK3 696 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 RACGAP1Q9H0H5 632 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 OR51I1Q9H343 314 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 RNF167Q9H6Y7 350 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 PROK2Q9HC23 129 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 HHATLQ9HCP6 504 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 LYRM4Q9HD34 91 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 ACKR4Q9NPB9 350 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SLC35C2Q9NQQ7 365 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 MBNL3Q9NUK0 354 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CHCHD3Q9NX63 227 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 NUDT19A8MXV4 375 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CCRL2O00421 344 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 PGRMC2O15173 223 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SLC43A1O75387 559 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 REM1O75628 298 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 GPR75O95800 540 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 AIFM1O95831 613 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 IGKV3-11P04433 115 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CHRM4P08173 479 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 IGFBP1P08833 259 aaPredicted RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 OR12D1P0DN82 309 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 GATA4P43694 442 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 GAS1P54826 345 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SLC37A1P57057 533 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SMIM11AP58511 58 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 TNFRSF17Q02223 184 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 DUSP2Q05923 314 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF181Q2M3W8 571 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SPDYE7PQ495Y7 208 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 PRR31Q5SQ13 230 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 NSUN5P2Q63ZY6 315 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 ZBTB8BQ8NAP8 495 aaPredicted RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 FAM83FQ8NEG4 500 aaPredicted RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 FAM210AQ96ND0 272 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 MGLLQ99685 303 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 NXF5Q9H1B4 397 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SP140LQ9H930 580 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CES1P1Q9UKY3 287 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 TMCC3Q9ULS5 477 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SVEP1Q4LDE5 3571 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 C17orf51A8MQB3 221 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 GPX5O75715 221 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 SOX14O95416 240 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 LGI1O95970 557 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 HEXAP06865 529 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CT62P0C5K7 136 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 DBTP11182 482 aaKnown RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CEACAM8P31997 349 aaPredicted RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TIMP3P35625 211 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CASP3P42574 277 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 XKP51811 444 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF45Q02386 682 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF91Q05481 1191 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 PLCXD2Q0VAA5 305 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TP53BP2Q13625 1128 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 SF3B4Q15427 424 aaKnown RBP eCLIP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TSTQ16762 297 aaKnown RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TIMM50Q3ZCQ8 353 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ENTPD8Q5MY95 495 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 SHEQ5VZ18 495 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TIGD3Q6B0B8 471 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 PODNL1Q6PEZ8 512 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 FAM111BQ6SJ93 734 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 DEF8Q6ZN54 512 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CCDC190Q86UF4 302 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 LINC00471Q8N535 108 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 OR5D16Q8NGK9 328 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 OR8J1Q8NGP2 316 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 VANGL1Q8TAA9 524 aaPredicted RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 CNRIP1Q96F85 164 aaPredicted RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 WDYHV1Q96HA8 205 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 PRRC1Q96M27 445 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 Q96MT0 163 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TRNT1Q96Q11 434 aaKnown RBP4.3□□□□□ -1.72
LINC00550-201ENST00000629293 FAIM2Q9BWQ8 316 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 ANKRA2Q9H9E1 313 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 QPCTLQ9NXS2 382 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 TAS2R10Q9NYW0 307 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 PHF11Q9UIL8 331 aa4.3□□□□□ -1.72
LINC00550-201ENST00000629293 DTX4Q9Y2E6 619 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms