RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 IGHV3-13P01766 116 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 OPN1SWP03999 348 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 ASAH2BP0C7U1 165 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 ANPEPP15144 967 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 CRYBA2P53672 197 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 LCN2P80188 198 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 RBBP4Q09028 425 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 SELPLGQ14242 412 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 PCGF3Q3KNV8 242 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 KLF17Q5JT82 389 aaPredicted RBP9.36□□□□□ -0.91
DDX41-218ENST00000625286 ENTPD8Q5MY95 495 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 SWT1Q5T5J6 900 aaKnown RBP9.36□□□□□ -0.91
DDX41-218ENST00000625286 DCAF12L2Q5VW00 463 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 SNX32Q86XE0 403 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 ARMC8Q8IUR7 673 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 BCL6BQ8N143 479 aaPredicted RBP9.36□□□□□ -0.91
DDX41-218ENST00000625286 LRRC18Q8N456 261 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 OR4M2Q8NGB6 313 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 NANPQ8TBE9 248 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 C11orf40Q8WZ69 217 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 ZNF566Q969W8 418 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 MARS2Q96GW9 593 aaKnown RBP9.36□□□□□ -0.91
DDX41-218ENST00000625286 DUX5Q96PT3 197 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 SEPHS2Q99611 448 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 PRSS27Q9BQR3 290 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 ZNF426Q9BUY5 554 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 SPATA5L1Q9BVQ7 753 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 SUCNR1Q9BXA5 334 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 C7orf69Q9H7B7 122 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 RNF121Q9H920 327 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 MEPEQ9NQ76 525 aaPredicted RBP9.36□□□□□ -0.91
DDX41-218ENST00000625286 MMP26Q9NRE1 261 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 LEF1Q9UJU2 399 aaPredicted RBP9.36□□□□□ -0.91
DDX41-218ENST00000625286 FBXL3Q9UKT7 428 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 TRIM33Q9UPN9 1127 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 UGT2A1Q9Y4X1 527 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 SOX21Q9Y651 276 aaPredicted RBP9.36□□□□□ -0.91
DDX41-218ENST00000625286 USH1CQ9Y6N9 552 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 SLC22A23A1A5C7 686 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 ZSCAN5BA6NJL1 495 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 TRAPPC2LH3BP13 241 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 J3QLI3 93 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 M0QX08 132 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 KPNA4O00629 521 aaPredicted RBP9.35□□□□□ -0.91
DDX41-218ENST00000625286 RNF13O43567 381 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 CHP2O43745 196 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 FMO6PO60774 539 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 ERLIN1O75477 346 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 PRSS23O95084 383 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 HKR1P10072 659 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 SLC6A2P23975 617 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 CDAP32320 146 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 RAD52P43351 418 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 LIMS1P48059 325 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 IDH3AP50213 366 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 SCGB2A2Q13296 93 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 RUNDC3AQ59EK9 446 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 PABPC1L2AQ5JQF8 200 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 SPATA46Q5T0L3 261 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 THEM4Q5T1C6 240 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 ZNF613Q6PF04 617 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 SLC16A14Q7RTX9 510 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 KRT73Q86Y46 540 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 SIGLECL1Q8N7X8 197 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 SYT14Q8NB59 555 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 ICA1LQ8NDH6 482 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 DEFB108BQ8NET1 73 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 OR1J1Q8NGS3 322 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 CCL17Q92583 94 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 NABP1Q96AH0 204 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 NMD3Q96D46 503 aaKnown RBP9.35□□□□□ -0.91
DDX41-218ENST00000625286 SPDL1Q96EA4 605 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 POM121L2Q96KW2 1035 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 ZNF48Q96MX3 618 aaPredicted RBP9.35□□□□□ -0.91
DDX41-218ENST00000625286 CPPED1Q9BRF8 314 aaPredicted RBP9.35□□□□□ -0.91
DDX41-218ENST00000625286 CDH20Q9HBT6 801 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 SLCO1C1Q9NYB5 712 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 SELENONQ9NZV5 590 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 CCDC167Q9P0B6 97 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 KLHL21Q9UJP4 597 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 RAB21Q9UL25 225 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 SLC7A7Q9UM01 511 aa9.35□□□□□ -0.91
DDX41-218ENST00000625286 PRORSD1PA6NEY8 169 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 CLDN25C9JDP6 229 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 SPRY3O43610 288 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 TRMUO75648 421 aaKnown RBP9.34□□□□□ -0.91
DDX41-218ENST00000625286 SLC2A10O95528 541 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 BCL10O95999 233 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 NGFP01138 241 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 F13BP05160 661 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 CD247P20963 164 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 LSP1P33241 339 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 ZNF81P51508 661 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 ZNF133P52736 654 aaPredicted RBP9.34□□□□□ -0.91
DDX41-218ENST00000625286 SLC18A1P54219 525 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 UGT2B15P54855 530 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 NCALDP61601 193 aa9.34□□□□□ -0.91
DDX41-218ENST00000625286 SEC61A1P61619 476 aaKnown RBP9.34□□□□□ -0.91
DDX41-218ENST00000625286 MMEL1Q495T6 779 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms