RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 C8BP07358 591 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 QDPRP09417 244 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 GLO1Q04760 184 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 RPL18Q07020 188 aaKnown RBP9.79□□□□□ -0.84
CPNE3-210ENST00000621245 RBBP4Q09028 425 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 GKAP1Q5VSY0 366 aaPredicted RBP9.79□□□□□ -0.84
CPNE3-210ENST00000621245 CGB2Q6NT52 195 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 TTC33Q6PID6 262 aaPredicted RBP9.79□□□□□ -0.84
CPNE3-210ENST00000621245 JAZF1Q86VZ6 243 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 CALHM3Q86XJ0 350 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 CCDC36Q8IYA8 594 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 CLDN22Q8N7P3 220 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 LINC01356Q8N9X3 169 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 SYT14Q8NB59 555 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 BHLHE22Q8NFJ8 381 aaPredicted RBP9.79□□□□□ -0.84
CPNE3-210ENST00000621245 IL17RDQ8NFM7 739 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 OR4K5Q8NGD3 323 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 ASB10Q8WXI3 467 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 MCHR2Q969V1 340 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 MAGEB18Q96M61 343 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 RACGAP1Q9H0H5 632 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 PCDHAC1Q9H158 963 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 NANSQ9NR45 359 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 ZNF275Q9NSD4 429 aaPredicted RBP9.79□□□□□ -0.84
CPNE3-210ENST00000621245 DUSP13Q9UII6 198 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 ZNF229Q9UJW7 825 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 UGT2A1Q9Y4X1 527 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 CACNG2Q9Y698 323 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 DYSFO75923 2080 aa9.79□□□□□ -0.84
CPNE3-210ENST00000621245 A0A0G2JND7 137 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 A0A1W2PPW3 197 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 DHHO43323 396 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 OR6A2O95222 327 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 SERPINA5P05154 406 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 MMP7P09237 267 aaPredicted RBP9.78□□□□□ -0.84
CPNE3-210ENST00000621245 UMPSP11172 480 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 ITGA2P17301 1181 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 CDAP32320 146 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 AQP2P41181 271 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 OR1E2P47887 323 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 FMODQ06828 376 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 HIST3H3Q16695 136 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 VMACQ2NL98 169 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 NANOGP8Q6NSW7 305 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 CCDC80Q76M96 950 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 PIWIL3Q7Z3Z3 882 aaKnown RBP9.78□□□□□ -0.84
CPNE3-210ENST00000621245 NANOGNBQ7Z5D8 188 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 ZNF540Q8NDQ6 660 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 SLC30A7Q8NEW0 376 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 NOXO1Q8NFA2 376 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 STON2Q8WXE9 905 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 ZNF566Q969W8 418 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 SLC25A44Q96H78 314 aaPredicted RBP9.78□□□□□ -0.84
CPNE3-210ENST00000621245 SEPHS2Q99611 448 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 TMEM120AQ9BXJ8 343 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 NANOGQ9H9S0 305 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 TREM2Q9NZC2 230 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 SLC7A8Q9UHI5 535 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 TMEFF2Q9UIK5 374 aaPredicted RBP9.78□□□□□ -0.84
CPNE3-210ENST00000621245 TRIM33Q9UPN9 1127 aa9.78□□□□□ -0.84
CPNE3-210ENST00000621245 MEGF8Q7Z7M0 2845 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 BLOC1S5-TXNDC5H3BN57 136 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 CDC14BO60729 498 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 TRMUO75648 421 aaKnown RBP9.77□□□□□ -0.85
CPNE3-210ENST00000621245 RGS9O75916 674 aaPredicted RBP9.77□□□□□ -0.85
CPNE3-210ENST00000621245 OR7A10O76100 309 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 HNF1AP20823 631 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 THBS2P35442 1172 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 EVX1P49640 407 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 GALK2Q01415 458 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 PIN1Q13526 163 aaPredicted RBP9.77□□□□□ -0.85
CPNE3-210ENST00000621245 SPRNQ5BIV9 151 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 AVPI1Q5T686 147 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 REP15Q6BDI9 236 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 DEF8Q6ZN54 512 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 C1orf229Q6ZS94 237 aaPredicted RBP9.77□□□□□ -0.85
CPNE3-210ENST00000621245 PATL1Q86TB9 770 aaKnown RBP9.77□□□□□ -0.85
CPNE3-210ENST00000621245 LRRC18Q8N456 261 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 CPEB3Q8NE35 698 aaKnown RBP9.77□□□□□ -0.85
CPNE3-210ENST00000621245 HDAC2Q92769 488 aaKnown RBP9.77□□□□□ -0.85
CPNE3-210ENST00000621245 NABP1Q96AH0 204 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 NMD3Q96D46 503 aaKnown RBP9.77□□□□□ -0.85
CPNE3-210ENST00000621245 ANAPC16Q96DE5 110 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 MRPL13Q9BYD1 178 aaKnown RBP9.77□□□□□ -0.85
CPNE3-210ENST00000621245 TAAR3PQ9P1P4 343 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 SH3GLB1Q9Y371 365 aa9.77□□□□□ -0.85
CPNE3-210ENST00000621245 PRKDCP78527 4128 aaKnown RBP9.76□□□□□ -0.85
CPNE3-210ENST00000621245 HMGB1P1B2RPK0 211 aaPredicted RBP9.76□□□□□ -0.85
CPNE3-210ENST00000621245 MGRN1O60291 552 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 VENTXO95231 258 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 ERCC1P07992 297 aaPredicted RBP9.76□□□□□ -0.85
CPNE3-210ENST00000621245 TSPAN19P0C672 248 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 OR8G3PP0DMU2 310 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 SAGP10523 405 aaPredicted RBP9.76□□□□□ -0.85
CPNE3-210ENST00000621245 MPV17P39210 176 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 WNT5AP41221 380 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 GPR6P46095 362 aaPredicted RBP9.76□□□□□ -0.85
CPNE3-210ENST00000621245 CLRN1P58418 232 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 LMO4P61968 165 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 SPATA46Q5T0L3 261 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms