RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 APODP05090 189 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 AGTR1P30556 359 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 SEC13P55735 322 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 LRRC69Q6ZNQ3 347 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 ATG4DQ86TL0 474 aaPredicted RBP17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 LINC00518Q8N0U6 118 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 KCNRGQ8N5I3 272 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 BPIFCQ8NFQ6 507 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 OR9A4Q8NGU2 314 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 TSEN15Q8WW01 171 aaKnown RBP17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 EDAQ92838 391 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 TSPAN32Q96QS1 320 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 MMP25Q9NPA2 562 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 IL23AQ9NPF7 189 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 SLC17A5Q9NRA2 495 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 UPB1Q9UBR1 384 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 GPANK1O95872 356 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 ASAH2BP0C7U1 165 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 ACTBP60709 375 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 ACTG1P63261 375 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 DEFA5Q01523 94 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 NFATC4Q14934 902 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 ARHGAP40Q5TG30 622 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 ASPHD2Q6ICH7 369 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 FAM166AQ6J272 317 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 BEST3Q8N1M1 668 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 ATOH1Q92858 354 aaPredicted RBP17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 SLC25A28Q96A46 364 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 LPAR4Q99677 370 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 NKX3-1Q99801 234 aaPredicted RBP17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 ATG5Q9H1Y0 275 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 CACNA1CQ13936 2221 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 CD96P40200 585 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 FNTBP49356 437 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 TAS2R19P59542 299 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 MC2RQ01718 297 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 NR0B2Q15466 257 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 GALNT16Q8N428 558 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 GATSQ8NAP1 163 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 TMEM229BQ8NBD8 167 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 OR5M8Q8NGP6 311 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 SEH1LQ96EE3 360 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 MNTQ99583 582 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 TAS2R3Q9NYW6 316 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 GRHPRQ9UBQ7 328 aa17.71■□□□□ 0.43
PDLIM3-212ENST00000620787 OIP5O43482 229 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 RAB3DO95716 219 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 CTSBP07858 339 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 HOXC4P09017 264 aaPredicted RBP17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 CCKBRP32239 447 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 EGR4Q05215 589 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 RPL18Q07020 188 aaKnown RBP17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 GRM7Q14831 915 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 ELP2Q6IA86 826 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 WBP2NLQ6ICG8 309 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 TMED4Q7Z7H5 227 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 OR1J2Q8NGS2 313 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 WDR92Q96MX6 357 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 POTEKPQ9BYX7 375 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 SFXN1Q9H9B4 322 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 MYOZ1Q9NP98 299 aaPredicted RBP17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 OBP2AQ9NY56 170 aa17.71■□□□□ 0.42
PDLIM3-212ENST00000620787 OR5H14A6NHG9 310 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 C2orf74A8MZ97 194 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 M0QYG6 137 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 PNMTP11086 282 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 SRSF4Q08170 494 aaKnown RBP17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 ZNF345Q14585 488 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 PABPC1L2AQ5JQF8 200 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 PDSS1Q5T2R2 415 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 EEF1A1P5Q5VTE0 462 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 GLT8D1Q68CQ7 371 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 TMEM17Q86X19 198 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 PATE1Q8WXA2 126 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 CCNL2Q96S94 520 aaPredicted RBP17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 INTS14Q96SY0 518 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 SLC25A21Q9BQT8 299 aaPredicted RBP17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 NKX6-2Q9C056 277 aaPredicted RBP17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 TINAGL1Q9GZM7 467 aaPredicted RBP17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 CRISPLD2Q9H0B8 497 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 TMEM185BQ9H7F4 350 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 EPHA6Q9UF33 1036 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 KCNG2Q9UJ96 466 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 TNFSF18Q9UNG2 199 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 ERVK-19Q9WJR5 959 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 PRELID3BQ9Y3B1 194 aa17.7■□□□□ 0.42
PDLIM3-212ENST00000620787 A0A0J9YY10 115 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 HSPB2A8KAH6 182 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 CNR1P21554 472 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 LUMP51884 338 aaPredicted RBP17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 ARHGDIBP52566 201 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 TOMM20Q15388 145 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 HSPB2Q16082 182 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 KLHL26Q53HC5 615 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 CLVS2Q5SYC1 327 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 ATPAF1Q5TC12 328 aaPredicted RBP17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 FDX2Q6P4F2 183 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 ZNF440Q8IYI8 595 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 ZNF75AQ96N20 296 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 PLA2G2FQ9BZM2 168 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms