RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 ASCL5Q7RTU5 278 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 LRRC28Q86X40 367 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-209ENST00000617930 OR11G2Q8NGC1 345 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 TXNIPQ9H3M7 391 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 ING3Q9NXR8 418 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 MRPL39Q9NYK5 338 aaKnown RBP15.72■□□□□ 0.11
CNOT3-209ENST00000617930 PPP4R1LQ9P1A2 415 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 B9D1Q9UPM9 204 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 A0A0G2JMP0 313 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 A0A0X1KG70 313 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 PRSS37A4D1T9 235 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 SLC43A1O75387 559 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 AHSA1O95433 338 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 FAM157BP0CG42 384 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 OR8G3PP0DMU2 310 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 ERP29P30040 261 aaKnown RBP15.72■□□□□ 0.11
CNOT3-209ENST00000617930 APOBEC1P41238 236 aaKnown RBP15.72■□□□□ 0.11
CNOT3-209ENST00000617930 GBX2P52951 348 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-209ENST00000617930 SUMO3P55854 103 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-209ENST00000617930 OR7A5Q15622 319 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 SLC25A35Q3KQZ1 300 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 RPL22L1Q6P5R6 122 aaKnown RBP15.72■□□□□ 0.11
CNOT3-209ENST00000617930 C6orf15Q6UXA7 325 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-209ENST00000617930 IL20RBQ6UXL0 311 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 DPY19L4Q7Z388 723 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 OR4M2Q8NGB6 313 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 OR2T4Q8NH00 348 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 GRPEL2Q8TAA5 225 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 MAP6Q96JE9 813 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 KCNJ15Q99712 375 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 METTL7AQ9H8H3 244 aa15.72■□□□□ 0.11
CNOT3-209ENST00000617930 TRBV2A0A0J9YWF9 115 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 C9J4A7 227 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 H3BML4 177 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 PIN1P1O15428 100 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 CTLA4P16410 223 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 EDNRAP25101 427 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 TRAM1Q15629 374 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 YIF1BQ5BJH7 314 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 CEP78Q5JTW2 689 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 C1QTNF12Q5T7M4 302 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 PRAMEF20Q5VT98 475 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 OR2M3Q8NG83 312 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 SLC22A8Q8TCC7 542 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 OR14A2Q96R54 314 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 PROK2Q9HC23 129 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 MRPL22Q9NWU5 206 aaKnown RBP15.71■□□□□ 0.11
CNOT3-209ENST00000617930 VSX1Q9NZR4 365 aaPredicted RBP15.71■□□□□ 0.11
CNOT3-209ENST00000617930 PADI1Q9ULC6 663 aa15.71■□□□□ 0.11
CNOT3-209ENST00000617930 CEP250Q9BV73 2442 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 IGLV1-36A0A0B4J1U3 117 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 OR2T1O43869 369 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 ZFPL1O95159 310 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 RENP00797 406 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 IGHMP01871 453 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 ARSBP15848 533 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 ZNF24P17028 368 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 TCN2P20062 427 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 ALOX5APP20292 161 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 RBMS1P29558 406 aaKnown RBP15.7■□□□□ 0.1
CNOT3-209ENST00000617930 SLC25A53Q5H9E4 307 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 LRRC69Q6ZNQ3 347 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 TRILQ7L0X0 811 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 MS4A15Q8N5U1 240 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 SAMD12Q8N8I0 201 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 TRIM63Q969Q1 353 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 RFT1Q96AA3 541 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 KCTD12Q96CX2 325 aaKnown RBP15.7■□□□□ 0.1
CNOT3-209ENST00000617930 ADAD1Q96M93 576 aaKnown RBP15.7■□□□□ 0.1
CNOT3-209ENST00000617930 SMAD5Q99717 465 aaKnown RBP15.7■□□□□ 0.1
CNOT3-209ENST00000617930 MARVELD1Q9BSK0 173 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 SLC22A23A1A5C7 686 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 INMT-MINDY4F8WBC2 141 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 TERTO14746 1132 aaKnown RBP15.7■□□□□ 0.1
CNOT3-209ENST00000617930 EIF4EP06730 217 aaKnown RBP15.7■□□□□ 0.1
CNOT3-209ENST00000617930 CAPZA2P47755 286 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 RRAS2P62070 204 aaPredicted RBP15.7■□□□□ 0.1
CNOT3-209ENST00000617930 HSF2Q03933 536 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 FAPQ12884 760 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 CCDC58Q4VC31 144 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 LIPNQ5VXI9 398 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 UNQ9370/PRO34162Q6UXP9 181 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 NHLRC1Q6VVB1 395 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 PPP1R32Q7Z5V6 425 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 TEX19Q8NA77 164 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 OR4M1Q8NGD0 313 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 MFSD8Q8NHS3 518 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 ZFAND1Q8TCF1 268 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 CREB3L1Q96BA8 519 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 UBL7Q96S82 380 aaPredicted RBP15.7■□□□□ 0.1
CNOT3-209ENST00000617930 TCFL5Q9UL49 500 aa15.7■□□□□ 0.1
CNOT3-209ENST00000617930 PTPRBP23467 1997 aa15.69■□□□□ 0.1
CNOT3-209ENST00000617930 IGKV1D-43A0A0B4J1Z2 117 aa15.69■□□□□ 0.1
CNOT3-209ENST00000617930 LIPT2A6NK58 231 aa15.69■□□□□ 0.1
CNOT3-209ENST00000617930 TM4SF5O14894 197 aa15.69■□□□□ 0.1
CNOT3-209ENST00000617930 ZNF208O43345 1280 aa15.69■□□□□ 0.1
CNOT3-209ENST00000617930 SLC16A7O60669 478 aa15.69■□□□□ 0.1
CNOT3-209ENST00000617930 RPP14O95059 124 aaKnown RBP15.69■□□□□ 0.1
CNOT3-209ENST00000617930 CD1AP06126 327 aa15.69■□□□□ 0.1
CNOT3-209ENST00000617930 MRPL28Q13084 256 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms