RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ZIK1Q3SY52 487 aaPredicted RBP13.07□□□□□ -0.32
UBXN1-218ENST00000616865 CARD17Q5XLA6 110 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 FAM205BPQ63HN1 556 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 SLC27A4Q6P1M0 643 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 OR2T33Q8NG76 320 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 OR6K3Q8NGY3 331 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 TMEM45BQ96B21 275 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 TXNDC15Q96J42 360 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 ADAD1Q96M93 576 aaKnown RBP13.07□□□□□ -0.32
UBXN1-218ENST00000616865 ZNF385AQ96PM9 386 aaKnown RBP13.07□□□□□ -0.32
UBXN1-218ENST00000616865 SLC29A1Q99808 456 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 EMC6Q9BV81 110 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 REPIN1Q9BWE0 567 aaKnown RBP13.07□□□□□ -0.32
UBXN1-218ENST00000616865 CXorf56Q9H5V9 222 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 ZNF701Q9NV72 531 aaPredicted RBP13.07□□□□□ -0.32
UBXN1-218ENST00000616865 TMEFF2Q9UIK5 374 aaPredicted RBP13.07□□□□□ -0.32
UBXN1-218ENST00000616865 RCE1Q9Y256 329 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 ADAM18Q9Y3Q7 739 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 FBN1P35555 2871 aaKnown RBP13.06□□□□□ -0.32
UBXN1-218ENST00000616865 CHD3Q12873 2000 aaKnown RBP13.06□□□□□ -0.32
UBXN1-218ENST00000616865 SLC35F4A4IF30 521 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 NPIPB13A6NJU9 1138 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 NPIPB4C9JG80 1138 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 IDH3BO43837 385 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 ZNF26P17031 533 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-218ENST00000616865 SDHAP31040 664 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 CLRN1P58418 232 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 FXYD6P3P58550 94 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 KRTAP1-1Q07627 177 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 NPRL3Q12980 569 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 CAMK2DQ13557 499 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 GINS1Q14691 196 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 NUFIP2Q7Z417 695 aaKnown RBP13.06□□□□□ -0.32
UBXN1-218ENST00000616865 JAZF1Q86VZ6 243 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 UBE2J2Q8N2K1 259 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 GPR137CQ8N3F9 429 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 LRRC75AQ8NAA5 344 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 ZNF555Q8NEP9 628 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 OR8D4Q8NGM9 314 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 OR6N1Q8NGY5 312 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 ASB10Q8WXI3 467 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 ZNF566Q969W8 418 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 APH1AQ96BI3 265 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 PLEKHA8Q96JA3 519 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 GPX7Q96SL4 187 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-218ENST00000616865 PRRG3Q9BZD7 231 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 PLA2G12AQ9BZM1 189 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 B3GAT2Q9NPZ5 323 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 NRIP3Q9NQ35 241 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 UPB1Q9UBR1 384 aa13.06□□□□□ -0.32
UBXN1-218ENST00000616865 ING1Q9UK53 422 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-218ENST00000616865 ZNF346Q9UL40 294 aaKnown RBP13.06□□□□□ -0.32
UBXN1-218ENST00000616865 CSPG4Q6UVK1 2322 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 TEX13CA0A0J9YWL9 993 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 OR6C65A6NJZ3 312 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 IMPA2O14732 288 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 CRLF1O75462 422 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 PLAUP00749 431 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 IFNGP01579 166 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 IGHG1P01857 330 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 IGHMP01871 453 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 TP53P04637 393 aaPredicted RBP13.05□□□□□ -0.32
UBXN1-218ENST00000616865 HMGN1P05114 100 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 APEHP13798 732 aaKnown RBP13.05□□□□□ -0.32
UBXN1-218ENST00000616865 ACADSP16219 412 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 GRK5P34947 590 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 SELENOPP49908 381 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 NR1H2P55055 460 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 ATP5J2P56134 94 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 MYBPC1Q00872 1141 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 KRR1Q13601 381 aaKnown RBP13.05□□□□□ -0.32
UBXN1-218ENST00000616865 SNCBQ16143 134 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 PGGHGQ32M88 737 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 SLC35F1Q5T1Q4 408 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 STAC2Q6ZMT1 411 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.05□□□□□ -0.32
UBXN1-218ENST00000616865 IQCF1Q8N6M8 205 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 ARIH2OSQ8N7S6 290 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 ZNF611Q8N823 705 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 ZIC4Q8N9L1 334 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 OR6X1Q8NH79 312 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 RASD2Q96D21 266 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 SLC25A44Q96H78 314 aaPredicted RBP13.05□□□□□ -0.32
UBXN1-218ENST00000616865 Q96M85 177 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 RDH12Q96NR8 316 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 SLC38A2Q96QD8 506 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 TSPAN32Q96QS1 320 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 OR2M2Q96R28 347 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 RASSF4Q9H2L5 321 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 TOR3AQ9H497 397 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 PLSCR4Q9NRQ2 329 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 SMPD3Q9NY59 655 aaPredicted RBP13.05□□□□□ -0.32
UBXN1-218ENST00000616865 KLHL21Q9UJP4 597 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 CUBNO60494 3623 aa13.05□□□□□ -0.32
UBXN1-218ENST00000616865 RIIAD1A6NNX1 92 aa13.04□□□□□ -0.32
UBXN1-218ENST00000616865 HS3ST1O14792 307 aa13.04□□□□□ -0.32
UBXN1-218ENST00000616865 ARPC3O15145 178 aa13.04□□□□□ -0.32
UBXN1-218ENST00000616865 SNAP29O95721 258 aa13.04□□□□□ -0.32
UBXN1-218ENST00000616865 RENP00797 406 aa13.04□□□□□ -0.32
UBXN1-218ENST00000616865 NR2C1P13056 603 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms